Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1646 ATGGAAGATAATCCTACTTCAAGTCTTTTGGAAGGGAAGGTGGTTGGGATCCGATTCAGTATGGCTACACGCCAGGAAATTAGTACTGCATCAATCAGCGATTCCCAAATTAGCCATGCTAGTCAGCTGGCAAATCCCTTTCTTGGGCTTCCACTTGAATTCGGAAGATGTGAATCTTGTGGCACTTCCGAAGCTGGCAAATGCGAAGGCCACTTTGGTTATATTGAACTTCCAGTGCCAATATACCATCCTAGTCATGTAACCGAGGTGAAGCGAATACTGAGCCTAGTCTGCTTAAGCTGCCTAAAACTGAAGAAAACAAAGGTACCTTCTTCAAGCAGTGGTTTGGCACAGAGATTATTATCTCCTTGTTGTGAGGATGTTAATGCTTCACAAGTTTCTATTCGGGAGGTCAAAACAGCTGATGGGGCTTGTTACTTAGCACTAAAGGTGCCAAAGTCAAAGATGCATGACGGATTTTGGAGTTTTTTAGAAAAATATGGCTATCGCTATGGGGGTGATCATACTCGAGCTTTGCTTCCTTGTGAGGCGATGGAAATTATGAAGAGAATTCCTCCAGAAACAAAAAAGAAACTTGCTGCAAAAGGATATTTTCCTCAAGATGGATATGTTTTGAAATACCTTCCGGTACCACCAAATTGCTTGTCTGTGCCAGTAGTTTCGGATGGTGTCAGTATCATGTCTTCGGATCCTGCCATGACGATTCTTAGAAAATTGCTTAGGAAGGTTGAAGTCATCAGAAGCTCTAGATCTGGTGAGCCAAACTTTGAGTCTCATCAAGTGGAAGCTAATGATTTGCAATCCGTAGTTGATCAGTATCTTCAAATTAGGGGTACTTCTAAGGCCGCACGTGATATAGAAACACATTATGGGGTCAATAAGGAGCTGAATGATTCCTCAACAAAGGCATGGTTAGAGAAAATGAGGACTTTATTTATAAGAAAGGGTTCAGGGTTTTCTTCCCGGAATGTAATAACTGGAGATGGCTATAAGAAAATAAATGAAGTAGGAATACCGCTTGAGGTTGCCCAAAGGATAACATTTGAGGAGAGAGTAAGCATCCATAACATCCATTATTTACAAAAGTTGGTGGATGAAAATTTGTGCTTGACATACAAGGAAGGTTTGTCTACTTACTCACTTAGGGAGGGCTCAAAGGGGCACACTTACCTTAAAACAGGTCAGATCGTCCATAGGAGGATAATGGATGGCGATACGGTCTTCATCAACAGACCGCCAACTACCCACAAGCACTCCTTGCAAGCACTTGTGGTGTACATCCACGACGACCACACAGTCAAAATTAATCCACTTATATGTGGACCCCTCGGAGCGGACTTTGATGGTGACTGTGTCCATCTTTTTTATCCCCAGTCACTTGCTGCTAAAGCTGAGGTTTTGGAGCTTTTCTCTGTTGAGAAACAACTTCTCAGCTCTCACAGTGGCAATTTGAACCTTCAGTTATCCTCTGATTCGTTACTGTCACTAAAGATGCTAGTCAAGAGTTGTTTTTTGGATAGAGCAACAGCTAATCAAATGGCAATGTTTCTTTCACTGCCTTTGCCAATGCCTGCTTTGCTTAAGGCTACATCTGGTGATTCTTTTTGGACATCTATTCAAATGTTGCAGTGTGCTTTGCCTTTCTCGTTTGATTGTACTGGAGTACGATACTTGATTAGGCAGAGGGAAATCTTAGAATTTGATTTTACCAAAGATGTCTTGCCTTCAATTATAAATGAAATAGCAGCCTCAATTTTTTTTGGCCAGGGTCCTCAGGAGGCACTCAATTTCTTTGATGTGATCCAGCCCTTTCTGATGGAAAACATATTTGCCCATGGATTTAGTGTTGGATTACAAGACTTTTCTATATCCAGGGCAGTGAAGAGAGTTATAAATAGAAGCATTGGGAAAGTTTCTCCTTTGTTGCGTCAGCTGCGGGACATATATGAAGAGCGTGTGGCTCAACAACTGGAGAATGAAATTCATGATATTGAACTTCCAGTCATAAATTTTGCTTTGAAGTCAACCAAACTTGGAGATTTGATTGACTCAAAGAGTAAGTCGGCGGTTGACAAGGTGGTTCAACAGATTGGCTTTTTAGGCCAACAACTCTTTGAGAGAGGAAAATTTTATTCCAAGGGATTGGTTGAGGATGTAGCTTCCCATTTTCATGTGAAGTGTTTCTATAAAGAGGAAGATTATCCCTCCGCCGAGTTTGGTTTGCTCAAAGGATGCTTTTTTCATGGTTTAGATCCATATGAAGAGTTGGTGCATTCAATTGCAACGAGAGAAATAATTGACCGCTCTTCTAGAGGATTATCTGAACCAGGCACACTATTTAAGAACTTGATGGCCATTCTCCGTGATGTTGTTATTTGCTATGATGGAACTGTGAGAAATGTGTGTAGTAATTCCATCATCCAGTTTGAATATGGCGTACAATCTGGAGACGCAGCACAACACTTATTCCCTGCTGGTGAGCCTGTAGGTGTCTTAGCTGCAACTTCAATGTCAAACCCTGCTTATAAAGCAGTCCTTGATGCTAGTCCTAGCAGTAATTCTTCATGGGGATTTATGAAGGAAATACTCCTTTGCAAGGTGAACTTCAGGAATGAATCAAATGATCGCCGTGTAATTTTATATTTAAATGATTGTGATTGTGGTAGGAATTATTGTCGAGAACGTGCTGCATATTTGGTTAAAAATCAATTAACCAAAGTAAGCCTCAAGGATGCAGCAGTAGATTTCATTATTGAATACCAGCAGCATCGAAGACACAATGATGGTACTGAAGATGCAGGCCTTGTTGGTCATATTCATCTAAATGAGGCGATGTTAGAGAACCATAAGATCAATATGACTGAAGTTTACCAAAAATGCCAAGAGAGACTTGATTCTTTTAGTCGGAAGAAGAAATACCCAATTTTTAAGAGAACCGAATTGTCTTTCAGTGAGTCATGCTATTCTCCAAACTATGCTGCCCCTTGTGTAACATTCCATTGGCGGGATGGTGATGATTTGGACCAAACCACTAAAGTCTATGCTGACATCATCTGCCCAGTTCTGTTAGAATCCATAATCCAAGGAGACCCTCGTATCAGCTCGGCAAGTATAATTTCGGTTAATCCTGGAACAAACACATGGGTCCGTAACCCGTCCAAATCTTCTAATGGTGAATTAGCACTGGACGTCATTCTTGAGAAGGAAGCTGTTAAACAAAGTGGTGATGCTTGGAGGATTATACTTGATTCCTGTCTTCCTGTTCTTCATTTGATTGATACTAGGCGTTCTATACCTTATGCTATTAAGCAAATTCAGGAATTACTGGGAATATCATGTACGTTTGATCAAGCGATTCAGCGTCTTGCAGCATCAGTAAGAATGGTGGCAAAAGGTGTTCTCAGAGAGCATCTCATTCTCTTAGCAAGTAGTATGACTTGTGGTGGAAATTTGGTTGGTTTTAATACAGGTGGTTATAAAACGCTGGCTCGTCAATTAAATATTCAAGTACCATTCACCGACGCAACACTCTTTACTCCTAGAAAATGCTTTGAAAGAGCTGCTGAGAAACACCACGCAGACTCTTTGTCTAGCATTGTTGCTTCCTGTTCTTGGGGTAAACACGTGGCGGTTGGTACAGGATCAAGTTTTGATATTGTATGGGATCCCAAAGAGATTAACACAAACGAAATTGAAGGGATGAATGTTTACAAGTTTCTTCACATGGTCAAAGGCCTTGCCAATGGGGAAGAAGAAAACAATGCTTGTTTGGGTGAGGACATTGATGATTTGCTCGATGATGAAAATGTGGACTGGGATATGTCCCCACAGCATACCTCTGGATTTGATGCTGTCTTTGATGAGACTTTTGAACTACCGAGTGACCCAACATCAAATGGTTGGGATTCAAATAAAGACCAGATTGATCAGGCCAAAACAAACTCGAATGATTGGTCTGCTTGGGGACAAAAAAAATCTGAAATACAAGACTCTTCAAAGTCTAGTGGCTGGGGGGCTGCCACAAATCAAAATAGTGAGTCTTCCTGGGGTAAAAGTACACAGGGAGGTGAAGATGATGCAGTACAAAACTCCCAATGGGAGTCTGGGATTCAAGAAGACTCTTCAAAGTCTAGTGCTTGGGGGGCTGCCACCAATCAAAATAATGATCAGTCTTGGGGTAAAACGAAACCTGTAGCACAAGATGCAGTACAAACCACCCAATGGGAGTCAGGGATTCAAGAACAGTCTAGTGCTTGGGGGGCTGCTTCAAATCAAAACAGTGACCAGTCTGATGGACCTCAAAAGGCTATGTGGGTGTCTGGGAGCTCTCAAAAGTGGGGATCTGGTGTTACCCAAGAAGACTCATCAAAATCTGGTGCTTGGGGGGCTGCTACCAATCAAAATAATGATCAGTCTTGGGGTAAAACGAAACCTGTAGCACAAGATGCAGTACAAACCACCCAATGGGAGTCAGGGATTCAAAAACAGTCTAGTGCTTGGGGGGCTGCTTCAAATCAAAACAGTGACCAGTCTGATGGACCTCAAAAGGCTATGTGGGTGTCTGGGAGCTCTCAAAAGTGGGGATCTGGTGTTGCCCAAGAAGACTCTTTAAAATCTGGTGCTTGGGAGGCCAACACAATTCAAAACAGTGGTAAGGCCTCTTGGGGCAAAAATAAAACTGTAGTGCTAGATGCTGGAGAGGAAAGGGCCCACGAAGAGTCTGGGAGCATTACAAAATGGAAAGCAGATAGTATCCAAGAAGACTTGTCAAGCTCAGGTGGTTGGAAAGCTTGGGGAAAAAGTAAAACCAATGTACACGAGGGTGAGTCTACAAAAGTACAAGAAGATTCTTGGAACTCCCAGAAATTGAAAGCTGGAGCTGATGTTACCCAAGAAGACTCTGCGAAGTCTGGTTCTTGGGGTGCAATCAAAGATGCAACAAAATCCAAGTCGAATGATTGGTCCTCGTGGGGAGGGAAAAAAGATGAGATACATAAGCCGGACAACGTTAAGGACAGTTGGGATGCCAAATTGCCAGTTGCCAATAGCTCTTGGGGAAAGCCCAAATCACCAGAAAACCAACCTTGGGATAACAAGAATGAATCAAATAGCTCTTGGGGAAAACCCAAATCACATGAAAACCAGCCATGGGATTCCAAAACTGAGCCAAATAGTAGCTCTTGGGGAAAACCCAAATCACAAGAGAACCAGCCTTGGGATTCCAAAACTGAGCCAAATAGTAGCTCTTGGGGAAAACCCAAATCACAAGAAAACCAGCCTTGGGATTCCAAAACCGAGCCAAATAGCTCTTGGGGAAAACCCAAATCACAAGAAAACCAACCTTGGACCAAGAATGACTCGAATCAAAGTGCAAGTTCACGTGGATGGGACTCACATGTTGCTTCTGCTAACTCTGATGGCGACCGAAGTTTTCAGTGGGGAAAACAAGGAAGAGACTCATTTAAGAAAAATCAGTTTGAAGGTTCACAAGGTCGGGGTTCAAATGCTGGGGACTGGAGAAATCAGAATCGCCCTGTCAGAGCACCTGGACAGAGGTTCGAATTATACTCTTCTGAGGAGGAGCAGGATATTCTCAAGCATATTGAACCTATTGTGCAGTCCATCAGAAAAATCATGCAGCAAGAAGGATACAATGATGGGGATCCACTAGCTGCTGATGACCAAAAGTATGTTCTTGAGAATGTCTTTGAACATCATCCAGATAAAGAAACAAAAATGGGTGCTGGAATTGATCATGTCATGGTTAGCAAACACAGCAATTTTCAGGACAGCAGATGCTTGTATGTGGTTTTAAAAGATGGTAAAAAAGAAGACTTTTCGTACCGTAAGTGCCTGGAAAACTTAGTGAGGAAGAAATTTCCAGAAACTGCCGAATCGTTCTGCGGAAAATATTTTAGGAAACCCCAACCCCGTGTAAAGAGGGACCAGACTCCAAACCCAGCAGGGGAGCAGACTGCAACTCCAAACCCAGCAGGGGAGCACACCTCTAACCCGAATCCAGAAAGGGAGCAGACCTCTAACCCGAATCCAGCAGGGGAGCAGACAACTACTTCAGCCGGTGATCAGACTTCAACACCAAATCCAGCGGAGGACCAGAACACAACTCCAATGGCTATGGAAACCAATGAGTAG 6174 0.4271 MEDNPTSSLLEGKVVGIRFSMATRQEISTASISDSQISHASQLANPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHVTEVKRILSLVCLSCLKLKKTKVPSSSSGLAQRLLSPCCEDVNASQVSIREVKTADGACYLALKVPKSKMHDGFWSFLEKYGYRYGGDHTRALLPCEAMEIMKRIPPETKKKLAAKGYFPQDGYVLKYLPVPPNCLSVPVVSDGVSIMSSDPAMTILRKLLRKVEVIRSSRSGEPNFESHQVEANDLQSVVDQYLQIRGTSKAARDIETHYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIHYLQKLVDENLCLTYKEGLSTYSLREGSKGHTYLKTGQIVHRRIMDGDTVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSSDSLLSLKMLVKSCFLDRATANQMAMFLSLPLPMPALLKATSGDSFWTSIQMLQCALPFSFDCTGVRYLIRQREILEFDFTKDVLPSIINEIAASIFFGQGPQEALNFFDVIQPFLMENIFAHGFSVGLQDFSISRAVKRVINRSIGKVSPLLRQLRDIYEERVAQQLENEIHDIELPVINFALKSTKLGDLIDSKSKSAVDKVVQQIGFLGQQLFERGKFYSKGLVEDVASHFHVKCFYKEEDYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIDRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVQSGDAAQHLFPAGEPVGVLAATSMSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFRNESNDRRVILYLNDCDCGRNYCRERAAYLVKNQLTKVSLKDAAVDFIIEYQQHRRHNDGTEDAGLVGHIHLNEAMLENHKINMTEVYQKCQERLDSFSRKKKYPIFKRTELSFSESCYSPNYAAPCVTFHWRDGDDLDQTTKVYADIICPVLLESIIQGDPRISSASIISVNPGTNTWVRNPSKSSNGELALDVILEKEAVKQSGDAWRIILDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLNIQVPFTDATLFTPRKCFERAAEKHHADSLSSIVASCSWGKHVAVGTGSSFDIVWDPKEINTNEIEGMNVYKFLHMVKGLANGEEENNACLGEDIDDLLDDENVDWDMSPQHTSGFDAVFDETFELPSDPTSNGWDSNKDQIDQAKTNSNDWSAWGQKKSEIQDSSKSSGWGAATNQNSESSWGKSTQGGEDDAVQNSQWESGIQEDSSKSSAWGAATNQNNDQSWGKTKPVAQDAVQTTQWESGIQEQSSAWGAASNQNSDQSDGPQKAMWVSGSSQKWGSGVTQEDSSKSGAWGAATNQNNDQSWGKTKPVAQDAVQTTQWESGIQKQSSAWGAASNQNSDQSDGPQKAMWVSGSSQKWGSGVAQEDSLKSGAWEANTIQNSGKASWGKNKTVVLDAGEERAHEESGSITKWKADSIQEDLSSSGGWKAWGKSKTNVHEGESTKVQEDSWNSQKLKAGADVTQEDSAKSGSWGAIKDATKSKSNDWSSWGGKKDEIHKPDNVKDSWDAKLPVANSSWGKPKSPENQPWDNKNESNSSWGKPKSHENQPWDSKTEPNSSSWGKPKSQENQPWDSKTEPNSSSWGKPKSQENQPWDSKTEPNSSWGKPKSQENQPWTKNDSNQSASSRGWDSHVASANSDGDRSFQWGKQGRDSFKKNQFEGSQGRGSNAGDWRNQNRPVRAPGQRFELYSSEEEQDILKHIEPIVQSIRKIMQQEGYNDGDPLAADDQKYVLENVFEHHPDKETKMGAGIDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKFPETAESFCGKYFRKPQPRVKRDQTPNPAGEQTATPNPAGEHTSNPNPEREQTSNPNPAGEQTTTSAGDQTSTPNPAEDQNTTPMAMETNE* 2058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1646 2057 PANTHER DNA-DIRECTED RNA POLYMERASE 197 1379 IPR045867 GO:0003899|GO:0006351
Tpr7g1646 2057 Pfam RNA polymerase Rpb1, domain 5 756 1168 IPR007081 GO:0003677|GO:0003899|GO:0006351
Tpr7g1646 2057 Gene3D RNA polymerase Rpb1, domain 3 487 622 IPR042102 -
Tpr7g1646 2057 Pfam RNA polymerase Rpb1, domain 2 325 479 IPR000722 GO:0003677|GO:0003899|GO:0006351
Tpr7g1646 2057 SMART rpolaneu7 208 507 IPR006592 GO:0003677|GO:0003899|GO:0006351
Tpr7g1646 2057 Pfam RNA polymerase Rpb1, domain 3 482 627 IPR007066 GO:0003677|GO:0003899|GO:0006351
Tpr7g1646 2057 Pfam Protein of unknown function (DUF3223) 1890 1959 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1662 1680 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1621 1644 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1830 1848 - -
Tpr7g1646 2057 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 197 1379 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1320 1544 - -
Tpr7g1646 2057 Pfam RNA polymerase Rpb1, domain 1 37 282 IPR007080 GO:0003677|GO:0003899|GO:0006351
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1320 1539 - -
Tpr7g1646 2057 Gene3D RNA polymerase II, clamp domain 6 121 IPR044893 -
Tpr7g1646 2057 Gene3D RNA polymerase ii 354 406 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1571 1857 - -
Tpr7g1646 2057 Gene3D - 322 486 - -
Tpr7g1646 2057 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 12 1231 - -
Tpr7g1646 2057 Gene3D - 1872 1965 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1992 2057 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1571 1585 - -
Tpr7g1646 2057 Gene3D - 796 836 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1981 2057 - -
Tpr7g1646 2057 MobiDBLite consensus disorder prediction 1693 1818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1646 Tpr-Chr7 18697428 18725008 Dispersed