Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1638 ATGAACATGTTAGGCTTAAGAGACTTAGTTCTCATAGCTCAAACTCCTTCATCTCTTCACAACCAACAAAACCAACCCATTTCATCAGATCATCATCCCAACCTTCCCTTACCTTCATCATCATCATCAGCTCTAAGTGTTGGTCTTGGAATTTTCCCACTCCTAACTACTACTACTCCTCCTCATCATCAAGACTCAAACTTTTGGAATCTCAAGATGTGTCAACCACAACAAGTGATGATAATGAATTCTACAAGCAAAAGGGTTGAAGAAAAAGAAGATGAAAAGATAAAAAATTTGATGATAGAGGAAAATAGTAATGGTGGTGATGAGTTTAAGGTGTGTTTGGATTGTGGAAACAGAGCTAAGAAAGATTGTAGCTTTAAGAGATGTAGGACTTGTTGTAAAGGTCGTGGTTTTGATTGTAGTACTCACGTGAAGAGCACGTGGGTACCGGCTTCGTTGCGCCGTGACCGGAAAATGGTGTTGGCTGAAACCGGTTATAGTGATGGTGGTGGTGGTGGTGTTTCTTCTGGTACCAAGAGGCAGAGGATTTTGGTGTCATCATCACATAATGCTGCTACTTCTCATAGTTCTAGTTCAATTGCTGCTACAAGAAGCTTAAGCTTAGATATTACTAGCTCTTGTCATCAAGATGCTAGATTCAAACAATCTTTGCCACGTTATGTTCGTGCACCTGCTGTTTTCAAGTGCCATAGAGTTTCTGCTATTGGCAATGGTGAAGATGAACTTGCTTATTTGGCGACAGTGAATATTAGTGGTCATGTCTTCAAAGGGTTTCTTTATGATCAAGGTATTGATGCAAAAAATGAAACAAAACCTTGTGTTTCAGAACTTCAACTTGGAAGTAATGGCAGTGGAAAGAGTTACAGGGAATGTTCTTCTTCTGCAATTGAGGTTCCAACTAGTGCATATCCTGCATCTGCTTGCTAA 954 0.3994 MNMLGLRDLVLIAQTPSSLHNQQNQPISSDHHPNLPLPSSSSSALSVGLGIFPLLTTTTPPHHQDSNFWNLKMCQPQQVMIMNSTSKRVEEKEDEKIKNLMIEENSNGGDEFKVCLDCGNRAKKDCSFKRCRTCCKGRGFDCSTHVKSTWVPASLRRDRKMVLAETGYSDGGGGGVSSGTKRQRILVSSSHNAATSHSSSSIAATRSLSLDITSSCHQDARFKQSLPRYVRAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGIDAKNETKPCVSELQLGSNGSGKSYRECSSSAIEVPTSAYPASAC* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1638 317 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 317 IPR007818 GO:0003700|GO:0006355
Tpr7g1638 317 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 317 - -
Tpr7g1638 317 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 226 273 IPR006511 -
Tpr7g1638 317 MobiDBLite consensus disorder prediction 20 41 - -
Tpr7g1638 317 Pfam Domain of unknown function (DUF702) 114 274 - -
Tpr7g1638 317 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 114 155 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1638 Tpr-Chr7 18622116 18628225 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Tpr7g1638 DUF702 1.6e-53 No_clan