Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1594 ATGGCGACTAAACGACCGGGTTCGGTTGAAGATTTGAACTTAGATGCACTACAGGAGCTTTTCAAGCCACACATAGAATCTTTCGATCATATGATTGATGCTGGATTGGAAACCATGTTCGACCATATCAAACCTGTTGTAGTTACTCATCCTTCAAAGCCACAAAAACTTACAATTATGTTGAAAAATCCGAAGATACATCTGCCACAGAAGACGGATGGAATTGCGAGGACAACACACGGTTGGTTGTATCCATTTGAGTGTAGACAAGCAAAAATCTCATATACAGGGAGGTTCACGGCAAATGTGTGTTTTCAATATAATGACGGTGGGAAAATTGGGCCTCAAATAAGAGAAAATATTAATTTTGGGCACTTTCCCATAATGCTGCAGTCTAAGCTATGCAACTTGAAAGGCAAGGGTCCCCGGGAACTTGTGTCCTACAAGGAAGAGGCAACGGAAATGGGCGGTTACTTCATCTTGAATGGCCTTGAGAGATTTATTCGACCTATAATTATGCCAAAACGGAATTATCCGATGAGTACGGTGCGAAGTTCATTTAGTGACAGACGGGAAGGATATACTGATAAAGCAGTTGTAATAAGGTGTGTGAGAGCTGATCAAACCTCGTTAACGGTAAAATTATATTACCTTAGTAATGGAAGTGCAAGACTTGGTTTCTGGGTACAAGGAAGAGAGTACATGCTTCCCGTGGGCATTCTTTTGAAGGCCCTCATCGACACCACTGACCGAGAAATTTATGCAAATTTGACAAGCTATTATAATGAAAAGTATGAAAAGGGAAAGGGTGTTGTCGGAACCCCGCGTATTGGTGATAGGGCACAAATAATCTTAGACGAACTTCACGATTTGTCTCTTTTCACTCGTCTTCAATGTCTACAATATATCGGAGAGCATTTTCAACCTATTATGCGTGAACTCAGAAATGAAAGCCATTATATTGTCGCTGATGCTGTTCTGAACGACTACATACTTGTTCATCTCAAAAACAATTTTGACAAGTTCAATCTGCTCATATTCATGTTGCAGAAACTTTTTTCACTTATAGATCATACATCGGTGCCGGATAACCCTGATAGCTTGCAAAATCAAGAGATTTTACTCCCTGGGCATCTGATCACAATTTATCTTAAGGAAAAACTAGAAGAGTGGCTGGCGAAAGGAAAATATATGGTTCTGGACGAGATTAATAAAAAAGGAGAGAAGTTTGATTTCACTGACAGTTTTCAAGTTAGGAAAATTTTGGAAAAAAATCATGCACCGGGAATCAGTTTAACAATTGAAAACATGTTGAAAACTGGAAGATTGGCTACACAGACAGGTCTGGATCTGAATCAGAGGGCAGGATTTACAATCATGGCTGAACGGTTAAACTTTTTACGATTCCTGTCGCATTTTCGTGCTGTCCATCGAGGTGCTGCATTTGCCGGAGCTCGTAATACAACTGTGCGGAAACTATTGCCTGAATCTTGGGGTTTTTTATGCCCTGTACACACACCTGATGGGGAGCCCTGTGGATTATTAAATCATATGACCCACACTTGTAGAATTACGTCATTCTATGATTCTCAAGGAAATCTTAAAGTTGATTACAAAATTAAAACGTCTATCCTCAACATTTTAATTGAGACCGGAATGACACAATCATTGCCAAAGATACTTTTACCTGGCCCGCCAGAAGTTCTTACTGTTCTTCTAGATGGTTGTATTGTTGGTTTTATCCCTTCCACTGAGGTTGAGAAAGTTGTTGCTCACCTTCGAGAACTGAAAGTGTCATCTTCTGCAGTGATTCCAAATGATTTGGAAGTGGGATATGTTCCTTTGAGTATGGGTGGACAATATCCTGGCCTCTACCTCTTCACATCTGCTTCAAGATTTGTTCGCCCAGTGAGGAATATATCAATTCCTTCCAATGGAAATGAAAATATTGAACTCATTGGTCCATTTGAACAGGTTTATATGGAGATACAATGTCCTGATGGTGGAAATGGTGGAAGAAAAAGTCCATTTCCTGCAACTCATGAGGAAATCCATCCAACAGGAATGCTAAGTGTAGTTGCTAATCTTACACCATGGTCAGATCATAATCAGAGCCCACGAAATATGTACCAGTGTCAGATGGCAAAGCAAACAATGGCATTTTCTTCACAAACGATTAAACTTCGTGCAGATCAGAAGTTATATCATCTTCAGACTCCTCAGTCTCCCATTGTTCGCACAAGTGCATATACTAAATACAATGTTGATGAATTTCCAACAGGCACAAATGCTATAGTTGCAGTTCTGGCATATACAGGATATGATATGGAGGATGCCATGATTCTTAATAAGTCATCTGTGGAACGTGGAATGTTTCACGGACAAATATATCAGACAGAAACTGTTGACTTGGCAGAGCGAGGTAGTCGGTCAGAACAAGCTTCAAGAACATTCCGAAAAAGTAACCAAGATAAATCTTGTCCTGCAATTGATTCAGATGGGCTTCCACATGTTGGTCAGAGAATACGGCCAGGCGAACCCTATTGTAGCACTTACAACGCAATAACGAATAAAACATATCTATTCAATAAAAAGGGTACTGAAGATGCTTATATTGACTCTGTTGCTGTTGACGTCAAAAATGGGAAGCATCTAAAGAAGGCTAATATACGCTTTCGATACCCTCGAAACCCTATAATTGGTGATAAATTTAGCAGTAGACATGGGCAGAAAGGTGTTTGCTCTCAGTTGTGGCCAGATATTGACATGCCATTTTCTGGAAATACGGGGATGCGCCCAGATCTTATTATAAATCCTCATGCATTTCCTTCTAGGATGACGATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGGGAGGTAGTTTACATGGAAAATATAAAGATGCAACTCCATTTCGTAGTTCAGTGAAGACAGATGGTGAGAAGTCTGGATCCAAGTCGGCTTCACTTGTTGATGAGCTTGGTGTTATGTTAAAAGAGAAGGGATTTAATTACCATGGATGTGAGGTTCTGTACAGCGGGGTTTATGGAACAGAACTGACATGTGAGATATTTATTGGGCCTGTTTATTATCAGCGGCTTCGTCACATGGTTTCAGACAAATACCAAGTTAGATCTACTGGCCCTATTGATCCAGTCACCCGGCAGCCAGTAAAAGGACGAAAGCGTGGTGGAGGAGTACGATTTGGAGAAATGGAACGCGACTCTCTACTAGCACACGGGGCCGCGTATCTTTTGCATGATAGGCTGCACACCTGTTCTGATTATCACATTGCTGATGTGTGTTCCATTTGTGGAAGCCTGCTTACGACAACATTCATCCAGCCTCAAAAGCTGCCGGTTCGACAGATTGTTGGACTACCACCACGAAAACCTCCAAGTAAAGTTGCTTGTCATGCTTGCCAAACCGGTAAAGGCATGGAGACAGTTGCCATGCCTTATATATTTAGATATTTGGCAGCAGAGTTAGCATCAATGAACATTAAAATGACTCTGAAGCTAAGTAATTGA 3531 0.4084 MATKRPGSVEDLNLDALQELFKPHIESFDHMIDAGLETMFDHIKPVVVTHPSKPQKLTIMLKNPKIHLPQKTDGIARTTHGWLYPFECRQAKISYTGRFTANVCFQYNDGGKIGPQIRENINFGHFPIMLQSKLCNLKGKGPRELVSYKEEATEMGGYFILNGLERFIRPIIMPKRNYPMSTVRSSFSDRREGYTDKAVVIRCVRADQTSLTVKLYYLSNGSARLGFWVQGREYMLPVGILLKALIDTTDREIYANLTSYYNEKYEKGKGVVGTPRIGDRAQIILDELHDLSLFTRLQCLQYIGEHFQPIMRELRNESHYIVADAVLNDYILVHLKNNFDKFNLLIFMLQKLFSLIDHTSVPDNPDSLQNQEILLPGHLITIYLKEKLEEWLAKGKYMVLDEINKKGEKFDFTDSFQVRKILEKNHAPGISLTIENMLKTGRLATQTGLDLNQRAGFTIMAERLNFLRFLSHFRAVHRGAAFAGARNTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTHTCRITSFYDSQGNLKVDYKIKTSILNILIETGMTQSLPKILLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHLRELKVSSSAVIPNDLEVGYVPLSMGGQYPGLYLFTSASRFVRPVRNISIPSNGNENIELIGPFEQVYMEIQCPDGGNGGRKSPFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIKLRADQKLYHLQTPQSPIVRTSAYTKYNVDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETVDLAERGSRSEQASRTFRKSNQDKSCPAIDSDGLPHVGQRIRPGEPYCSTYNAITNKTYLFNKKGTEDAYIDSVAVDVKNGKHLKKANIRFRYPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYKDATPFRSSVKTDGEKSGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGPIDPVTRQPVKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSLLTTTFIQPQKLPVRQIVGLPPRKPPSKVACHACQTGKGMETVAMPYIFRYLAAELASMNIKMTLKLSN* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1594 1176 Pfam RNA polymerase Rpb2, domain 7 1065 1173 IPR007641 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 Gene3D RNA polymerase Rpb2, domain 2 179 359 IPR037034 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2 14 1172 - -
Tpr7g1594 1176 Pfam RNA polymerase Rpb2, domain 2 190 373 IPR007642 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 14 1172 IPR015712 GO:0003899|GO:0006351|GO:0032549
Tpr7g1594 1176 Gene3D - 694 1049 IPR037033 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 Pfam RNA polymerase Rpb2, domain 6 693 1063 IPR007120 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 Pfam RNA polymerase I, Rpa2 specific domain 578 635 IPR009674 GO:0003899|GO:0005634|GO:0006351
Tpr7g1594 1176 MobiDBLite consensus disorder prediction 806 826 - -
Tpr7g1594 1176 Pfam RNA polymerase beta subunit 20 420 IPR007644 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 ProSitePatterns RNA polymerases beta chain signature. 901 913 IPR007121 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 Gene3D - 14 178 - -
Tpr7g1594 1176 CDD RNA_pol_B_RPB2 20 1173 IPR015712 GO:0003899|GO:0006351|GO:0032549
Tpr7g1594 1176 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 17 1175 - -
Tpr7g1594 1176 Gene3D RNA polymerase alpha subunit dimerisation domain 1050 1176 - -
Tpr7g1594 1176 Pfam RNA polymerase Rpb2, domain 3 460 524 IPR007645 GO:0003677|GO:0003899|GO:0006351
Tpr7g1594 1176 Gene3D - 360 557 - -
Tpr7g1594 1176 Gene3D - 724 897 IPR014724 GO:0003899
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1594 Tpr-Chr7 18104218 18125174 Dispersed