Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1592 ATGACTCCTCCAGCTGAATTGGAGATGGAAGATACTAAGCCCTTTGTTGTAGTGGTCGATAATGGTGACCAAGCTGAGTCTCGCTTTGCTGTATTCTCCAAGAATGAGCTAGCATTGGATGAGAAAAGCTGTAAAGAAGCAATGGATCTGTTTGGAGAAACAAAACATCTTCTCATGGCAAATGTTTCATCAATCGGGAATGGAACGACAGAAGAAGCAGAACGGTACTGGTTTGCTTTTATTTTATACTCTATCAAGAGACTGGCTCAGAAAAACGTGGAGAGTGGAAAGGAAGAGACTGAGAATACTAGTCTTACCTTGTGTCGAATATTGAGAGCAGCAAAGCTTAAGTATTTTTCTGACCCTTATCTAGTATATAAGTTTGTAGTCTTGTCTATTATTTACAGTTATGTTTATCTTGTATTGAACAGCGTTCCAGATTTTTTTAAAGAACTTCCTCAGTTTGTTGTTAAGGCTGGTCCAATTTTAAGCAATCTATATGGCTCAGATTGGGAAAACAGGCTTGAGGCAAAGGAGATGCAAGCTAACACCATTCACTTGAAGGCTCTTAGCAAGTATTATAAGCGTGTATTTGAAGAGTTCTTTGTGTCAATTGATGCAAATGCTGAAAATAACTCATCTGTTACCACCAATCATGTATCTGAGTACCACCGTTTTGGATGGTTACTTTTCTTGGCGCTCCGTGTACATGCTTTCAGCCGTTTCAAAGACTTGGTGACTTGCACCAATGGTTTAATTTCAATCTTGGCTATCCTAATTATTCATGTTCCAGCCCGTTTTCGGAATTTCAACATTCACGACTCTTCGCGATTTGTTAAGAAAAGTAGCAAAGGTGTGGACCTCCTTGCTTCACTTTGCAACATATATAACACTTCAGAAGATGAGTTGAGGAAAACTATGGAGCAAGCCAATAATTTAGTAGCAGATATATTGAAAAAGCAACCCTGTTTGGCATCTGAATGCAAAACTGAAAACCTAGAAAATTTTGATAAAGATGGTTTAACCTATTTTAAAGATCTGATGGAGGAATCATCCTTGCCATCTAGTTTGAATGTCTTAGAAAAAGATTATGATCACATGACTCGCAACAAGGGTGAACTCGATGAAAGGTTATTCATTAATGAGGATGACAGCCTGCTAGCTTCAGGAAGTTTAGGAAGTTTTTCTGGAGGTTCTGTTTCAACAGGAGGTGGAAAGAGGAAATTTGATTTGATGGCATCACCTGCTAAGACCATTACAAATCCACTTTCACCCTACCGCTCTCCTGCTTCCCATGCTAATGGCATTCCAGGTAGCGCAAATTCAAAGATTGCTGCCACCCCTGTAAGCACAGCAATGACTACTGCAAAGTGGCTCCGCACTGTCATTTCTCCACTCCCATCAAAGCCCTCACAAGAGCTAGAGCGATTCTTGGCATCATGTGACAAGGATATTACAAGTGATGTAGTACGCAGAGCACAGATTATATTGCAAGCTATATTTCCTAGCAGTCCCCTTGGGGACCGATGTGTAACTGGAATCCTGCAAAGTGCTAACCTCATGGACAATATATGGGCAGAACAACGAAGATTAGAAGCTTTGAAGTTCTACTATAGGGTGTTGGCAACAATGTGCAGAGCAGAAGCTCAAATACTTGGCAACAATTTAACTCCACTGCTTACTAATGAGAGGTTCCATAGGTGTATGCTTGCATGTTCTGCAGAATTAGTCCTGGCTACTCACAAGACTGTGACAATGTTGTTCCCTGCTGTACTGGAGAGGACTGGAATCACAGCTTTTGATCTTAGCAAGGTGATCGAAAGTTTCATTAGACATGAAGAATCTCTCCCAAGAGAACTGAGGCGACATCTTAATTCATTGGAGGAACGACTTTTGGAGAGCTTGGTATGGGAAAAGGGTTCTTCAATGTATAATTCATTAGCAGTCGCTAGACCTGCCCTTTCTGCAGAAATCAATCGACTTGGTCTGTTAGCCGAACCAATGCCATCATTAGATGAAATTGCAATGCAGATTAACTTCTCTTGTGGAGGACTGCCCCCTGTGCCTTCCTTGCCCAAGCCTGAGACTTTGCCAGCTCAAAATGGGGACCCCAGATCACCAAAGCGGCTCTGTACAGAATATCGAAATGTGTTAGTGGAACGAAATTCTTTCACTTCACCGGTGAAAGACCGGCTTCTTCACTTGAGCAACCTTAAGTCAAAACTACTTCCACCTCCTTTGCAATCAGCATTTGCCAGTCCAACAAAGCCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAGCGTATTTTTCAGCAAGATTGTTAAGTTGGGAGCTGTCAGAATAAGCGGAATGGTTGAAAGGCTACGATTAGAACCGGAGATAAGGGAGAATGTATACTGTCTTTTCCAGCGAATCCTAAATCAATGGACATCTCTCTTCTTCAACCGTCATATTGACCAAATAATTTTGTGTTGCTTCTATGGAGTTGCAAAGATTTCACAACTGAACCTAACTTTTAGGGAGATTATATACAACTATAGGAAGCAACCACAATGCAAGCCACAGGTTTTTCGTAGTGTATTTGTTGACTGGTCCTTGGCACGCCGTAATGGGTCATCTAGACAAAGAACAGGACAGGAGCACATCGATATCATTTCCTTTTACAATGAAGTTTTCATTCCCTCTGTAAAGCCACTTCTGGTTGAACTTGGCCCTGGTGGAGCAACTATGAGAAGTGATCAACCACCTGAAGCTAACAACAAAAATGATGGCCATTTAGTTCAAAATCCTGGCTCTCCTAGAATATCACCTTTCCCAAGCCTTCCTGATATGTCACCTAAAAAAGTGTCTGCCACACACAATGTGTATGTCTCTCCATTACGATCATCCAAGATGGATGCTCTAATTTCACATAGCTCCAAAAGCTATTATGCATGTGTTGGGGAGAGCACTCATGCCTATCAGAGCCCTTCGAAAGACCTTACTGCCATAAACAATCGGTTAAACAGCAACCGGAAAGTAAGAGTAGGACCGCTCAAATTTGATGATGTCGATGTGGGCTTGGTTAGTGACTCTATGGTTGCAAAAAGCCTCTATCTGCAGAATGGAAGTTCTGGGTCATCATCTGGTGCACCGTTGAAGTCCGACCAACTTGACTCTTAA 3177 0.4189 MTPPAELEMEDTKPFVVVVDNGDQAESRFAVFSKNELALDEKSCKEAMDLFGETKHLLMANVSSIGNGTTEEAERYWFAFILYSIKRLAQKNVESGKEETENTSLTLCRILRAAKLKYFSDPYLVYKFVVLSIIYSYVYLVLNSVPDFFKELPQFVVKAGPILSNLYGSDWENRLEAKEMQANTIHLKALSKYYKRVFEEFFVSIDANAENNSSVTTNHVSEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPARFRNFNIHDSSRFVKKSSKGVDLLASLCNIYNTSEDELRKTMEQANNLVADILKKQPCLASECKTENLENFDKDGLTYFKDLMEESSLPSSLNVLEKDYDHMTRNKGELDERLFINEDDSLLASGSLGSFSGGSVSTGGGKRKFDLMASPAKTITNPLSPYRSPASHANGIPGSANSKIAATPVSTAMTTAKWLRTVISPLPSKPSQELERFLASCDKDITSDVVRRAQIILQAIFPSSPLGDRCVTGILQSANLMDNIWAEQRRLEALKFYYRVLATMCRAEAQILGNNLTPLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESLVWEKGSSMYNSLAVARPALSAEINRLGLLAEPMPSLDEIAMQINFSCGGLPPVPSLPKPETLPAQNGDPRSPKRLCTEYRNVLVERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLRLEPEIRENVYCLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSLARRNGSSRQRTGQEHIDIISFYNEVFIPSVKPLLVELGPGGATMRSDQPPEANNKNDGHLVQNPGSPRISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNRKVRVGPLKFDDVDVGLVSDSMVAKSLYLQNGSSGSSSGAPLKSDQLDS* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1592 1058 Pfam Domain of unknown function (DUF3452) 144 262 IPR024599 -
Tpr7g1592 1058 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 10 119 IPR028309 GO:0006357|GO:0051726
Tpr7g1592 1058 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 140 1044 IPR028309 GO:0006357|GO:0051726
Tpr7g1592 1058 MobiDBLite consensus disorder prediction 1039 1058 - -
Tpr7g1592 1058 Coils Coil 296 320 - -
Tpr7g1592 1058 SMART DUF3452_2 88 262 IPR024599 -
Tpr7g1592 1058 Pfam Retinoblastoma-associated protein B domain 771 902 IPR002719 GO:0005634|GO:0051726
Tpr7g1592 1058 PANTHER BNACNNG22930D PROTEIN 10 119 - -
Tpr7g1592 1058 PANTHER BNACNNG22930D PROTEIN 140 1044 - -
Tpr7g1592 1058 Gene3D - 450 637 - -
Tpr7g1592 1058 SUPERFAMILY Cyclin-like 455 649 IPR036915 -
Tpr7g1592 1058 Gene3D - 223 381 - -
Tpr7g1592 1058 SMART RB_A_2 447 647 IPR002720 GO:0005634|GO:0051726
Tpr7g1592 1058 Coils Coil 357 377 - -
Tpr7g1592 1058 Pfam Retinoblastoma-associated protein A domain 447 647 IPR002720 GO:0005634|GO:0051726
Tpr7g1592 1058 Gene3D - 734 926 - -
Tpr7g1592 1058 SUPERFAMILY Cyclin-like 769 944 IPR036915 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Tpr7g1592 RB_A 2.1e-61 CL0065