Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1576 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAGTTTCTACGCCGAAAATGTCAACCAGAATGTGCATTTGCACCTTATTTTCCACCTGATCAACCACAAAAATTTGCAAATGTTCATAGAATTTTTGGAGCAAGTAATGTTACAAAGCTTCTTAATGATTTACATCCTCACCAACGTGAAGATGCGGTTAATTCACTTGCTTATGAAGCCGAAATGAGACTTCGCGATCCGGTTTACGGTTGTGTAGGTGTAATTTCTCTCCTTCAACATCAACTTCGTCAACTTCAAATGGATCTTTATTGTGCAAAATCCGAACTCTCCAGGTACCAAAACTTGAGTCTCGCAGCTACTGCCGGTCATGGACTCATAACCGGTTTGACAGGTGAATCTGTCACGGCCACAACTAATTACCACCACACGCAGAACAACACTGGTGGTGGTAATATTAATAGTAATGGCCGTGACCGTGACCATCATTATCATCATCAATTTTTTCCAAGGGATCAACATCAACATAATTTGGTTAGAAATTTTGATGCTGGAATTGGGAATAACTATGATGCTAGTCTTTTGGCTATGAATATATCTGCAAGCTTAGGTCAGATTAATCAGCTTCAACACCATAGTGCTGCCGGCGGTGGTGGTGACGACCGCCGTACTATTAACCGCACCTAG 678 0.4174 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSLAATAGHGLITGLTGESVTATTNYHHTQNNTGGGNINSNGRDRDHHYHHQFFPRDQHQHNLVRNFDAGIGNNYDASLLAMNISASLGQINQLQHHSAAGGGGDDRRTINRT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1576 225 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Tpr7g1576 225 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Tpr7g1576 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 183 - -
Tpr7g1576 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1576 Tpr-Chr7 17919253 17920026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1576 2 223 AS2 family AT1G65620 60.811 3.63e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g1576 LOB 3.3e-42 No_clan