Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1568 ATGGCCACTGAAAAATCAAATTCCTATGAGAGTTGTAAACACTACATGGCTATGATATGTTTACAATTTGGCTATGCTGGTATGAATATTATCACTAAGGTTTCACTCAACCAAGGAATGAGTCACTATGTCCTCGTCGTTTATCGTCATGCTTTCGCAACTGCTTGCATAGCTCCATTTGCATTTTTTCTTGAAAGGAAAGGTCAACCAAAGATAACATTCCGAATTTTCATGCAAATTTTCATCCTAGCTCTTCTCGGGCCAGTGATTGATCAGAATTTCTATTATGCTGGGTTGAAGCTTACATCACCAACTTTTTCTTGTGCAATGAGTAACGTGCTTCCTGCCATGACTTTTGTGATGGCAGTTATATGCAGGATGGAGAAGATAAACATAAAGCAAGTAAGGTGCCAAGCAAAGATATTTGGCACAATATTGACAGTAGCTGGTGCAATGCTAATGACATTATACAAAGGTCCTATTGTGGAGATGTTTTGGGCCAAACATAGACATCCTCAAAATGAAACACATGAAACAACCACCACAGGATCTTCTGAAAAAGATTGGATTTTAGGCTGCACTTTCCTTATCCTTGCCACCTTTGCTTGGGCTTGTCTCTTTGTTTTGCAAGCAAAAGTTATAGAGACGTATAAGCATCATCAGCTAAGTCTAACTTCACTTATGGTCTTCATTGGTACTCTTCAAGCTATTGCTGTTACTTTGGTGGCTGAGCACAATCTTTCTGTTTGGAGGATTGGTTGGGATATGAGTTTACTTGCTGCTGCTTATGCTGGGATTGTGACCTCAAGCTTGGCATACTATGTGCAAGGGCTAGTGATTAGGAAGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCACTTATGATGATCATTGTTGCTGTCATGGGCTCCTTTATCCTTGCAGAACAGATTTATTTTGGAGGTGTGATGGGTGCAATCTTGATTGTGATAGGCTTATATTCTGTTCTATGGGGAAAGCACAAGGAAGAAATAGAGAGAAAAGTTGATGATATTCCTTTGCCTATAAAGAGTACTCAAATGAGTGGAAATTTAGGGCCAGTGATTGATGACACAGATCAAGTAAAACATGGTCAAGTTGGTGATACTAACAACATGCTTTCTTCACTTGCAATAACTATGCCTACTAGAGAGCCTACTAATAATAATGTTAACCAACAATAA 1203 0.3932 MATEKSNSYESCKHYMAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATACIAPFAFFLERKGQPKITFRIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVICRMEKINIKQVRCQAKIFGTILTVAGAMLMTLYKGPIVEMFWAKHRHPQNETHETTTTGSSEKDWILGCTFLILATFAWACLFVLQAKVIETYKHHQLSLTSLMVFIGTLQAIAVTLVAEHNLSVWRIGWDMSLLAAAYAGIVTSSLAYYVQGLVIRKKGPVFATAFSPLMMIIVAVMGSFILAEQIYFGGVMGAILIVIGLYSVLWGKHKEEIERKVDDIPLPIKSTQMSGNLGPVIDDTDQVKHGQVGDTNNMLSSLAITMPTREPTNNNVNQQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1568 400 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020|GO:0016021
Tpr7g1568 400 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Tpr7g1568 400 PANTHER WAT1-RELATED PROTEIN 9 368 - -
Tpr7g1568 400 PANTHER WAT1-RELATED PROTEIN 9 368 IPR030184 GO:0016021|GO:0022857
Tpr7g1568 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Tpr7g1568 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1568 Tpr-Chr7 17709436 17713380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1568 1 391 Nodulin-like Gene Family AT5G07050 63.366 5.34e-179 502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4777 3 52706977 52710789 Tpr7g1568 7 17709436 17713380 PCT