Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1565 ATGAAGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATTATGCAAGCTGATGAGGATGTTGGAAAGATAGCATTAGCTGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGCTATTTCTGCAAGATCTTTGTGATCGTACTTATGAAATAACTCTTCAAAGAGGAGCGAAAACCATGAACTCGTTGCATTTAAAACATTGTGTACAAAGCTATAATGTTTTTGACTTTCTGAAGGATGTAGTCAGCAAGGTTCCTGACTACGGCCATGGTCATGGCCATACTGATGCTGGTGCTGATGATCAGACCATTTCAAAAAGAAGGAAAGCTGCAGGTGACGATGGTAATGAAAGCGATGAAGAAGCTAAGAGGGGCAAAATGCTTGAGTTGAGCCACACTAGCCCTACTGGTAGGGGAAGAGGCCGAGGTAGAGGTAGAGGACGTGGTCGAGGTCGTGGACGAGCTATACCAAGAGAGGGACATCATCAGGACGCTGAGTCTGAGCCTTGTCCTTCTGTTCAGCAAGTTAGCCAACATAGTGTAGATACAAATGTGGCTATACTTGATGGCTCAGAGTCAAATGAGTTACCAAAGCCGAGTGTTGTTATTCTTCCTGTTGATAACTCCGACTCACTCCTTAATATTGATCTGAATGCCAATATGAACGAAAATGATGACAAAAAGGCTAGTGCAGTTGCTAATCTCACACCTACTAATCCTGAAGCCGCTAATCCCCCATTGTCTGTACCTCCTCCAACAGACATCAAGCATCATGAAGAAATTCCGGGCTGGTCCCTTTCTGAGGTTGACAAGATGGCCATTGATTCAATGCAGCTTGCACAGCTTGGTACGCGAATGGATGAGGATGATGAAGATTATGACGAGGAAGGGTAA 900 0.4444 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLKDVVSKVPDYGHGHGHTDAGADDQTISKRRKAAGDDGNESDEEAKRGKMLELSHTSPTGRGRGRGRGRGRGRGRGRAIPREGHHQDAESEPCPSVQQVSQHSVDTNVAILDGSESNELPKPSVVILPVDNSDSLLNIDLNANMNENDDKKASAVANLTPTNPEAANPPLSVPPPTDIKHHEEIPGWSLSEVDKMAIDSMQLAQLGTRMDEDDEDYDEEG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1565 299 MobiDBLite consensus disorder prediction 95 130 - -
Tpr7g1565 299 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Tpr7g1565 299 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Tpr7g1565 299 PANTHER HISTONE SUPERFAMILY PROTEIN 1 298 - -
Tpr7g1565 299 SUPERFAMILY Histone-fold 3 89 IPR009072 GO:0046982
Tpr7g1565 299 MobiDBLite consensus disorder prediction 154 168 - -
Tpr7g1565 299 MobiDBLite consensus disorder prediction 95 180 - -
Tpr7g1565 299 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1565 Tpr-Chr7 17683736 17686751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1565 1 288 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.333 1.33e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tpr7g1565 CBFD_NFYB_HMF 2.3e-19 CL0012