Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1559 ATGATAGTCCTCAATATGGAAGGAACACAACTAAATTTGGCATCAATATTTTTTGCTTTCCTACTATATCTAAGCTTAAAACAAATCATTACCAAAGCTCAATCTCCAACATATGTGGGAGATGACTGTAATTACTCAAAACAACAGCCTCTTAGCAATGCATACCAAAAAAATCTCAATAGCATCCTTTCATATCTGTCTAATGATTCAGCCACAAGCAAAGGTTATAACTATACCAGAATAGGGGACAACACGACTAAAGGTGATGCAGTGTATGGTCTCTATGATTGCCGCGGCGATGTGGTTGGATACTTTTGTGAATTTTGTGTCTCTTCTGCTTCCAGAGAAGTTCTTGGGCGCTGCCCGGATAGAGAATCTGCTACTATATTTTATAGCTTCTGCATTTTTAGGTACTCAAATGAGAACTTCTTTGGGAAAGTAACAACAGACCCTTGGTGGAATCATTTAGGAACCAAAAACGTCTCTAGTGCGATAGAGATTCAGAAAGGCGGTGATTTTATGAAACGTTTGATCAGAAAAGCAACTAATGAGACCAACCAGTTGTACTATATGGATGGTTTCAATTTGAGTTCTACGGAGAGTAGGTACGGACTGGTTCAATGCAGTAGAGATCTTACAAATGAAAGGTGCAGACAGTGTTTAGAGTTTATGTTAGCAAAGGTTCGCACATGTTGCGAACATAAGTTGGGATGGCAGGTTTCATCTGCTAGTTGTCTGATTAGGTATGATGATTATATGTTCTATCTGCTCCACGATCAATCACCTTCGGTACTTGTGCCTAATCCACAAACAGCAAATAAGAAGAGTACTAGTAAGTCAAGAAAGTTGATCATTGGCTTTAGTGTTGTTGGTATAGTAATTCTACTATGTTCCACTCTATATTACTTCTGGTACAAGAAAAGAGTTAGAAAAGATTGGCTGACACCTGCATATGAGGAAACACTTAATGCAGATTTGCCTACAATTCCACTGATCACAATTCAACATTCTACTGATAACTTTTCAGAAACATCTAAATTAGGGGAAGGTGGATTTGGATCTGTTTATAAGGGTATTCTGCCAGATGGAAGACAAATAGCAGTAAAAAGGCTCTCAAAAAATTCTGGTCAAGGCTCAGAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAACTGCAACATCGCAATCTTGTAAGACTTTTGGCATGCTGCTTGGAAGGAAATGAAAAGCTACTTGTGTATGAGTTTATGCCGAATGCAAGTCTCGACTTTCACCTGTTTGATGATGAAAAAAGAAAGGAACTTAATTGGAAACTAAGTTTAAGTATTATCAGTGGAATAGCAAAAGGTCTTTTATATCTCCACGAGGACTCTAGACTAAGGGTAATTCATAGAGATCTGAAAGCTAGCAATGTTTTACTAGATCATGAAATGAATCCCAAAATATCGGATTTTGGAATGGCAAGGGCATTTGAAATAGGTCAGAACCAGGCGAATACAAGACGAATAATGGGCACCTATGGATACATGGCACCAGAGTACGCAATGGAAGGAGTATTTTCTGTGAAATCTGATGTATTCAGCTTTGGAGTACTAGTTTTAGAAATCATTAGTGGGAAAAAGAATACCGGATTCTATCTGTCAGAACATGGTCAAAGTCTTCTTGTATATACATGGAAAAAATGGTGTGAAGGTAACTGTTTGGATATTATGCATTCGGTAGTTGGAAAAACCTGTATAGACAATGAAGTTGTGAGGTGCATAAACATTGGTCTATTGTGTGTTCAAGAAGACGCGGCAGATAGACCAACCATGTCAACTGTTGTTGTAATGTTGGCTAGTGACACAATGGCCCTTCCGAAACCGAAACAACCTGCATTTTCAATTGGAAGAATGACCTCTGATGACAATTCTGCCTCGAAAAGTTCCAAGACGCCTTCCATTAATGATGTAACAGTCTCAAACATCTTACCAAGGTAA 1980 0.3823 MIVLNMEGTQLNLASIFFAFLLYLSLKQIITKAQSPTYVGDDCNYSKQQPLSNAYQKNLNSILSYLSNDSATSKGYNYTRIGDNTTKGDAVYGLYDCRGDVVGYFCEFCVSSASREVLGRCPDRESATIFYSFCIFRYSNENFFGKVTTDPWWNHLGTKNVSSAIEIQKGGDFMKRLIRKATNETNQLYYMDGFNLSSTESRYGLVQCSRDLTNERCRQCLEFMLAKVRTCCEHKLGWQVSSASCLIRYDDYMFYLLHDQSPSVLVPNPQTANKKSTSKSRKLIIGFSVVGIVILLCSTLYYFWYKKRVRKDWLTPAYEETLNADLPTIPLITIQHSTDNFSETSKLGEGGFGSVYKGILPDGRQIAVKRLSKNSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEGNEKLLVYEFMPNASLDFHLFDDEKRKELNWKLSLSIISGIAKGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGMARAFEIGQNQANTRRIMGTYGYMAPEYAMEGVFSVKSDVFSFGVLVLEIISGKKNTGFYLSEHGQSLLVYTWKKWCEGNCLDIMHSVVGKTCIDNEVVRCINIGLLCVQEDAADRPTMSTVVVMLASDTMALPKPKQPAFSIGRMTSDDNSASKSSKTPSINDVTVSNILPR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1559 659 ProSiteProfiles Gnk2-homologous domain profile. 36 143 IPR002902 -
Tpr7g1559 659 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Tpr7g1559 659 CDD STKc_IRAK 347 612 - -
Tpr7g1559 659 Gene3D Phosphorylase Kinase; domain 1 305 416 - -
Tpr7g1559 659 SUPERFAMILY Protein kinase-like (PK-like) 327 645 IPR011009 -
Tpr7g1559 659 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1559 659 Gene3D - 36 143 IPR038408 -
Tpr7g1559 659 Gene3D - 155 254 IPR038408 -
Tpr7g1559 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 657 - -
Tpr7g1559 659 Pfam Protein tyrosine and serine/threonine kinase 344 611 IPR001245 GO:0004672|GO:0006468
Tpr7g1559 659 Gene3D Transferase(Phosphotransferase) domain 1 417 622 - -
Tpr7g1559 659 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 24 657 - -
Tpr7g1559 659 Pfam Salt stress response/antifungal 174 252 IPR002902 -
Tpr7g1559 659 Pfam Salt stress response/antifungal 43 140 IPR002902 -
Tpr7g1559 659 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1559 659 Pfam Domain of unknown function (DUF3403) 614 659 IPR021820 GO:0004674
Tpr7g1559 659 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Tpr7g1559 659 MobiDBLite consensus disorder prediction 631 651 - -
Tpr7g1559 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1559 Tpr-Chr7 17627611 17631442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1559 17 659 Receptor kinase-like Gene Family AT4G05200 40.976 1.05e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1559 PK_Tyr_Ser-Thr 3.9e-48 CL0016