Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1553 ATGAAAACGTTACAACACAGCATAACATGTACTACAAGGTTCATTAGCTTCATTTTCCTCATATTTTTCCTCTTCATGACCCTATCAAGTGCACAATCAAAATCACCATTTTACATGCATAGTTTTTGTCAGAACCTAACAGAAAAAACAAACAACACTTCATACAAATCCAACGTTAACAACTTCCTTGCATGGATAATCACTGATTCTGTCACAGGCACATTATCTAATAACAACACCATAGGCAGCAAGAACAACAGTGATCACGACAATGTTTATGGGTTCTACGAATGTAGGGTTGGCATCACTGGAAGTTTCTGCCAATTCTGTATCAACACTGCTGTTGGACAAATCGCTCAACATTGTCCCAACAGTGACTCGTCTATGATATGGTATGATTTATGCATCATAGGTTATTCTAGCGAGAATTCCATAGGAAAAGTTATTGTAGAACCCTCATGGAATGTAACCGGATCCAAACTCACTAAGGACTCCACAGAACTTGCAAAAGTAGAGAATATCATGACGAGTTTGATAGGAAAAATGAGTATATCAGCCACTGCCAATTGGGCAGCGGGTGAGTTCTATTGGAGCCACACCGAGAAAAGGTATGGTTTGGTGCAGTGTAATAGATTGCTTAGTAAGGACGGGTGCAGACAGTGTTTAGAGGCTATGTTGGATAGAGTTCCTCGATGCTGTGGAACGAAGGTAGGATGGGCAGTTGTGTGTCCTAGTTGTGGAATTAAGATTGATGATTATAATTTCTACCAACAGCAAACAGAATCTCCTTCTCCTATTCCAAATCCAGGCAAGCAAGAAGGTTCAAGTAACAAAAAAACCTTAACCATAAGCTTAGTAAGTGTACTAATTGTAGTAGTTCTACTAACTTGTGGTGTCTACTACTCATGGAGAAGGAATAATAGGTTAAGTCAAGGTAATTTTGAAAAGTTACACACATATTTTAAGTTCTTCAACCTCATTTCACAAACTTTATTTTTTATAGGCGGATTGATGTCGAGGAACATTCCTACAGCTTTTCGACGTGATCATATTCAAACATATGATTCATCATTGAATGGAGACCTTCCAATTATCCCTTTAATTGTTATTCAACACAGCACTAATTACTTTTCGCTGTCTTCTAAATTAGGAGAAGGAGGATTTGGTTCTGTTTACAAGGGTACTTTACCGGATGGGACAGAAATTGCAGCCAAAAGGCTTTCAGAAACATCCGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTGATTTTCATAGCTAAACTACAACATAGAAACCTTGTGAAACTTTTGGGTTGTTGCTTCGAAGAAAATGAAAAGATACTAGTGTATGAGTACATGCCAAATTCAGGCCTCGACTTTCACCTTTTCAATTTGGAAAATCATAATCAACTAGATTGGAATAAACGTCTAAACATTATAAATGGAATCGCAAGAGGACTGTTATACCTTCACGAGGATTCTCGACTTAGAGTTATCCATAGAGATTTGAAAGCCAGCAATGTTCTTTTGGACGATGAAATGAATCCAAAGATATCAGATTTCGGATTGGCAAGAAGGTTCGAAAAAGGCCAAAGTCAGAGAGAAACAAAAAGAGTTATGGGAACTTACGGTTACATGGCTCCAGAATATGCTATGGCTGGATTGTTTTCGGTAAAATCTGATGTTTTTAGCTTTGGAGTGCTCGTATTGGAAATCGTTTATGGTAAAAGGAATGGTGAATTCTTCTTTTCGGAACACGGGCAAAGTCTTCTCTTAAATATTTGGAAACTCTGGTGTGAAGGAAAAAGTTGGGAATTTGTTGATCCGATCCAAAGAAAAACATACATCGAACGTGAAGTTTTAAAGTGCGTACACATTGGTTTATTGTGCGTGCAAGAAGATGCTGCAGATCGACCAACTATGTCCACTGTTGTTCTCATGCTAGGGAGCAACACGATGGTCCTTCCAAAACCCGAAAAACCAGCATTTTCTGTCGGAAGACTGCCCAATGAAGATTTAACTTCAAAAAGTTTTAACGAACTTACGGTAACTAGTTTTACACCTAGATAG 2070 0.3826 MKTLQHSITCTTRFISFIFLIFFLFMTLSSAQSKSPFYMHSFCQNLTEKTNNTSYKSNVNNFLAWIITDSVTGTLSNNNTIGSKNNSDHDNVYGFYECRVGITGSFCQFCINTAVGQIAQHCPNSDSSMIWYDLCIIGYSSENSIGKVIVEPSWNVTGSKLTKDSTELAKVENIMTSLIGKMSISATANWAAGEFYWSHTEKRYGLVQCNRLLSKDGCRQCLEAMLDRVPRCCGTKVGWAVVCPSCGIKIDDYNFYQQQTESPSPIPNPGKQEGSSNKKTLTISLVSVLIVVVLLTCGVYYSWRRNNRLSQGNFEKLHTYFKFFNLISQTLFFIGGLMSRNIPTAFRRDHIQTYDSSLNGDLPIIPLIVIQHSTNYFSLSSKLGEGGFGSVYKGTLPDGTEIAAKRLSETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCFEENEKILVYEYMPNSGLDFHLFNLENHNQLDWNKRLNIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARRFEKGQSQRETKRVMGTYGYMAPEYAMAGLFSVKSDVFSFGVLVLEIVYGKRNGEFFFSEHGQSLLLNIWKLWCEGKSWEFVDPIQRKTYIEREVLKCVHIGLLCVQEDAADRPTMSTVVLMLGSNTMVLPKPEKPAFSVGRLPNEDLTSKSFNELTVTSFTPR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1553 689 PANTHER PROTEIN KINASE DOMAIN 335 683 - -
Tpr7g1553 689 PANTHER PROTEIN KINASE DOMAIN 28 324 - -
Tpr7g1553 689 Pfam Salt stress response/antifungal 162 251 IPR002902 -
Tpr7g1553 689 Pfam Salt stress response/antifungal 43 141 IPR002902 -
Tpr7g1553 689 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 324 - -
Tpr7g1553 689 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 335 683 - -
Tpr7g1553 689 ProSiteProfiles Protein kinase domain profile. 377 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1553 689 SUPERFAMILY Protein kinase-like (PK-like) 361 673 IPR011009 -
Tpr7g1553 689 ProSiteProfiles Gnk2-homologous domain profile. 37 144 IPR002902 -
Tpr7g1553 689 Gene3D Phosphorylase Kinase; domain 1 342 452 - -
Tpr7g1553 689 SMART serkin_6 377 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1553 689 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Tpr7g1553 689 ProSiteProfiles Gnk2-homologous domain profile. 149 255 IPR002902 -
Tpr7g1553 689 CDD STKc_IRAK 383 648 - -
Tpr7g1553 689 Pfam Protein tyrosine and serine/threonine kinase 378 646 IPR001245 GO:0004672|GO:0006468
Tpr7g1553 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Tpr7g1553 689 Gene3D Transferase(Phosphotransferase) domain 1 453 655 - -
Tpr7g1553 689 Gene3D - 151 255 IPR038408 -
Tpr7g1553 689 Gene3D - 36 143 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1553 Tpr-Chr7 17498377 17502115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1553 23 663 Receptor kinase-like Gene Family AT4G05200 38.543 9.25e-160 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1553 PK_Tyr_Ser-Thr 7e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4791 3 52793193 52797748 Tpr7g1553 7 17498377 17502115 PCT