Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1551 ATGACTGTTGAATCAGATGGAGAGAATAGGATACGCTGTACTTTATGGGATGATTATGGTGTGAAAATGCAGCAATTTATCGATAGTCATGACCCATATCTGCCTGTGATAATCATACTTCAGTTGTGCAAACTTAAGAAATTTCTTGGTTCCATGGGAATTTCAAATTCTTTCTATGGATCGGAATCGTTCTTAAATGCTGAGATTCTTGGAATGAATGCTGCAAATGTGGAGTTAACTCAATTGGTTAGTCAAATGACTGGACCTGCCGTCATCAATGTGGCTGATGATTTGCTGCAGACACCCAAGATTACTATTGAAGATCTAATTGAATCTACTCAGGGTACCTTACCAGATGGCACAGAAGTTGCTGCCAAAAGGCTTTCAGAAACATCAGGTCAAGGTTCAGGGGAGTTCAAAAATGAAGTAAGATTCATAGCTAAACTGCAACACAGAAACCTCGTGAAACTCTTGGGTTGCTGCATTGAGGGAGACGAAAAAATACTAGTATATGAGTACATGCCAAATTCAAGCCTTGACTTTCACCTTTTCAATAAGGAAAAACAAAAACATCTATGTTGGAAATTACGACTAAGCATTATCAATGGAATTGCAAAAGGACTGCTTTACCTTCATGAGGATTCTCGACTTAGAGTAATCCATAGAGATCTGAAAGCCAAAAATGAAATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGACATTTGAAAAAGACCAATGTCTGACAAAAACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATACGCAATGGCTGGGTTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATAATTTATGGAAAAAGAAATGGCGAATTCGTTCTTTCAGAACATATGCAAAGTCTTCTATTATATACATGGAAACTCTGGTGTGATGGGAAATGTTTAGAATTAATCGATCCTTTCCACAAAAAGACGTTCATTGAAAGTGAAGTCTTGAAGTGCATACACATTGGTTTATTGTGCGTACAAGAAGATGCAGCGGATCGACCAACCATGGCCACTGTTGTTCGCATGCTAGGGAGTGACATAGTAGACCTTCCAAAACCCACGCAACCAGCATTTTCAGTTGGGAGAATGTCCAAGAATGAAGATAGAACTTCAAAAAATCCTAAGGATAATTCTGTTGATAAAGAAACCATAACTATTGTTTCACCTAGATAG 1236 0.3762 MTVESDGENRIRCTLWDDYGVKMQQFIDSHDPYLPVIIILQLCKLKKFLGSMGISNSFYGSESFLNAEILGMNAANVELTQLVSQMTGPAVINVADDLLQTPKITIEDLIESTQGTLPDGTEVAAKRLSETSGQGSGEFKNEVRFIAKLQHRNLVKLLGCCIEGDEKILVYEYMPNSSLDFHLFNKEKQKHLCWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKAKNEMNPKISDFGLARTFEKDQCLTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLLLEIIYGKRNGEFVLSEHMQSLLLYTWKLWCDGKCLELIDPFHKKTFIESEVLKCIHIGLLCVQEDAADRPTMATVVRMLGSDIVDLPKPTQPAFSVGRMSKNEDRTSKNPKDNSVDKETITIVSPR* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1551 411 SMART serkin_6 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1551 411 SUPERFAMILY Protein kinase-like (PK-like) 117 384 IPR011009 -
Tpr7g1551 411 ProSiteProfiles Protein kinase domain profile. 77 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1551 411 Gene3D - 1 83 IPR012340 -
Tpr7g1551 411 Gene3D Transferase(Phosphotransferase) domain 1 174 371 - -
Tpr7g1551 411 PANTHER PROTEIN KINASE DOMAIN 114 409 - -
Tpr7g1551 411 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 114 409 - -
Tpr7g1551 411 Pfam Protein tyrosine and serine/threonine kinase 120 364 IPR001245 GO:0004672|GO:0006468
Tpr7g1551 411 MobiDBLite consensus disorder prediction 386 400 - -
Tpr7g1551 411 MobiDBLite consensus disorder prediction 375 411 - -
Tpr7g1551 411 Gene3D Phosphorylase Kinase; domain 1 104 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1551 Tpr-Chr7 17470036 17473729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1551 111 381 Receptor kinase-like Gene Family AT4G23230 58.333 1.61e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1551 PK_Tyr_Ser-Thr 7.5e-40 CL0016