Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1550 ATGAAAACGTTACAACACAGCATAACATGTACTACAAGGTTCATTAGCTTCATTCTCCTCATATTTTTCCTCTTCATGACCCTATCAAGTGCACAATCAAAATCACCATTTTACATGCATGGTATTTGTCAGAACCTAACAGAAAAAACAAACAACACTTCATACAAATCCAACGTTAACAACTTCCTTGCATGGATAATCACTGATTCTGTCACAGGCACATTATCTAATAACAACACCATAGGCAGCAAGAACAACAGTGATCACGACAATGTTTATGGGTTCTACGAATGTAGGGTTGGCATCACTGGAAGTTTCTGCCAATTCTGTATCAACACTGCTGTTGGACAAATCGCTCAACGTTGTCCTAATGGTGACTCGGCTATGATATGGTATGATTTATGCATCATAGGTTATTCTAGCGAGAATTCCATAGGAAAAGTTATTGTAGAACCCTCATGGAATGTAACCGGATCCAAACTCACTAAGGACTCCACAGAACTTGCAAAAGTAGAGAATATCATGACGAGTTTGATAGGAAAAATGAGTATATCAGCCACTGCCAATTGGGCAGCGGGTGAGTTCTATTGGAGCCACACCGAGAAAAGGTATGGTTTGGTGCAGTGTAATAGATTGCTTAGTAAGGACGGGTGCAGACAGTGTTTAGAGGCTATGTTGGATAGAGTTCCTCGATGCTGTGGAACGAAGGTAGGATGGGTAGTTGTGTGTCCTAGTTGCGGAATGAAGATTGATGATTATAATTTCTACCAACAGCAAACAGAATCTCCTTCTCCTATTCCAAATCCAGACAAACAGGAAGATTCAGGTAACAAAAAAACCTTGATCATCATCTTGGTATGTGTACTGGTGGCAGTAGCTCTACTAATGTGTTGTGTCTGCTACTACTGGAGAAAGAATGGATTCAGTAAAGGTGGATTACTGTTGAGGACTGCTACTCCTATATCTTTCCGTGATCATGCTCAAGGAGAGGATGCACTCAATGGAGACCTTCCTACAATCCCTTTAACTGTAATTGAACAGATCACGGATAACTTTTCGGAGTTATCTAAATTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGTACATTACCAGACGGCACAGAAGTTGCTGTGAAAAGGCTTTCAGAAACATCAGGTCAAGGTTCAGAGGAGTTCAAAAATGAAGTAATATTCATAGCTAAACTGCAACACAGAAACCTTGTGAGACTCTTGGGTTGCTGCATTGATGGAAATGAAAAAATACTTGTATATGAATACATGCCAAATTCAAGCCTTGACTCTCACCTTTTCGATAAGGAAAAGCATAAGCAACTGGATTGGAAATTACGACTAAGCATTATCAATGGAATTGCAAAAGGACTGCTTTACCTTCATGAGGATTCTCCACTTCGAATAATCCATAGAGATCTGAAAGCCAGCAATGTTCTTCTGGATGATGAAAAGAATCCAAAAATATCAGATTTTGGATTGGCAAGGACATTTGAAAAGGACCAATGTCAGACAAAAACAAAACGAGTTATTGGCACCTATGGATACATGGCTCCAGAATATGCTATGGCTGGGTTTTTTTCAGTGAAATCAGACGTTTTTAGCTTTGGAGTTCTTTTATTAGAAATAATTTATGGAAAAAGAAATGGCGAATTCTTTCTTTCAGAACATATGCAAAGTCTTCTATTATATATTTGGAAACTGTGGTGCGAAGGAAAAAGTTTAGAATTAATTGATCCATTCCACAAAAAAACGTACATTGAAAGTGAAGTTTTGAAGTGTATACACATTGGTTTATTGTGTGTACAAGAAGAAGCAGCGGATCGACCAACCATGTCCACTGTTGTTCGTATGCTAGGAAGTGACACAGTATCCCTTCCAAAACCCAATCAACCAGCGTTTTCAGTTGGGAGAATGTCCAAGAATGAAGATCAAACTTCAAAAAATTTGAAGGATAATTATTCTGTTGATGAAGTAACACTAACTATTGTCTCACCTAGATAG 2016 0.3874 MKTLQHSITCTTRFISFILLIFFLFMTLSSAQSKSPFYMHGICQNLTEKTNNTSYKSNVNNFLAWIITDSVTGTLSNNNTIGSKNNSDHDNVYGFYECRVGITGSFCQFCINTAVGQIAQRCPNGDSAMIWYDLCIIGYSSENSIGKVIVEPSWNVTGSKLTKDSTELAKVENIMTSLIGKMSISATANWAAGEFYWSHTEKRYGLVQCNRLLSKDGCRQCLEAMLDRVPRCCGTKVGWVVVCPSCGMKIDDYNFYQQQTESPSPIPNPDKQEDSGNKKTLIIILVCVLVAVALLMCCVCYYWRKNGFSKGGLLLRTATPISFRDHAQGEDALNGDLPTIPLTVIEQITDNFSELSKLGEGGFGPVYKGTLPDGTEVAVKRLSETSGQGSEEFKNEVIFIAKLQHRNLVRLLGCCIDGNEKILVYEYMPNSSLDSHLFDKEKHKQLDWKLRLSIINGIAKGLLYLHEDSPLRIIHRDLKASNVLLDDEKNPKISDFGLARTFEKDQCQTKTKRVIGTYGYMAPEYAMAGFFSVKSDVFSFGVLLLEIIYGKRNGEFFLSEHMQSLLLYIWKLWCEGKSLELIDPFHKKTYIESEVLKCIHIGLLCVQEEAADRPTMSTVVRMLGSDTVSLPKPNQPAFSVGRMSKNEDQTSKNLKDNYSVDEVTLTIVSPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1550 671 ProSiteProfiles Gnk2-homologous domain profile. 37 144 IPR002902 -
Tpr7g1550 671 Gene3D Phosphorylase Kinase; domain 1 321 427 - -
Tpr7g1550 671 SUPERFAMILY Protein kinase-like (PK-like) 338 641 IPR011009 -
Tpr7g1550 671 Gene3D - 37 143 IPR038408 -
Tpr7g1550 671 Gene3D - 151 255 IPR038408 -
Tpr7g1550 671 Pfam Protein tyrosine and serine/threonine kinase 356 623 IPR001245 GO:0004672|GO:0006468
Tpr7g1550 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 669 - -
Tpr7g1550 671 ProSiteProfiles Gnk2-homologous domain profile. 149 255 IPR002902 -
Tpr7g1550 671 Pfam Domain of unknown function (DUF3403) 625 671 IPR021820 GO:0004674
Tpr7g1550 671 Pfam Salt stress response/antifungal 162 252 IPR002902 -
Tpr7g1550 671 Pfam Salt stress response/antifungal 43 141 IPR002902 -
Tpr7g1550 671 CDD STKc_IRAK 358 623 - -
Tpr7g1550 671 ProSiteProfiles Protein kinase domain profile. 352 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1550 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Tpr7g1550 671 PANTHER PROTEIN KINASE DOMAIN 28 669 - -
Tpr7g1550 671 Gene3D Transferase(Phosphotransferase) domain 1 428 632 - -
Tpr7g1550 671 SMART serkin_6 352 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1550 Tpr-Chr7 17459663 17463273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1550 16 671 Receptor kinase-like Gene Family AT4G05200 40.643 6.50e-175 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1550 PK_Tyr_Ser-Thr 1.6e-51 CL0016