Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1546 ATGATGTCTGATGAATCACAAAGGGTTGTTGTGATCCACCATGCATCTAGAGACTTCAGTGCAAGAGCTCTTAAATGGGCCATTAATGGCTTTTCACTTGAGCATGGAGATAGCCTTACACTTGTTTCAATTCTTCACCATGTAAAAAGTCCAACTAGTGCCAAATTTCGGGCAATATTTGGTAGTGATCAAAATATTGTTTATGAAGAGGTTGCCAAGAAGAAAGAAAAGATGTATAATAATGCATGCATCAAGAAAATTATTGATAAGTGTCAAACACACAAGATTCAGTTCTTGATAGAAGTTCTTCCAGGAAAATTACCAGAGCTTGCTATAGATGCTGCCATTCGTTTGAAAGCAACATCAGTTATACTTGATAGAGACATGAAGAAATATAAGAAGGATTTCATGCAGAGTCTCTCTTGTGCTTTGCTTATAATCAAACGTGATAACTCCATTAAGCACTTGAAAGGGCCATGGAAAACAATGATTTCTTTTAGAGGATATGACAATGAAACTTTTGAAAAATGTTCTGAATCCTCACCAAGTTTATGGAGCATGACAAACGCCGTTTTCCGCTCGAAATCGAGCTGTAATCTTACAAAGATAGTTTGTCATCAAATTCATTGTCAAATAAAACAAACTCCTGAAGATAGAGATCTAGATATGGCAAGAGGTTATTGCCTATTACCTAGTGCTCCTGAAATGTATCACAATGAGACAAAAATTGGACATATTAGCAACCATGAATCATATCATATAGTTGAAAAATTCAAAAATTCTGTTTGTTCAGTGTGTGAGAACAAAAGGCCAAAATTTGAATTGATGAAAGAATACACATATGTCGAGCTGCATGAAGCAACGCATGGTTTTTCGCCGAAGAATTATTTATCGGAAGGTGGATTTGGTTCTGTTTATTGTGGAAAGCTACACGGACTAAAGATTGCGGTTAAGAAACATAAGTTTGCAAGTCTTCAAGGAGAGAAGGAATTCAAATCTGAAGTTAATGCACTAAGCAAAGCAATACATGAAAATGTGGTCATGTTGTTAGGATCTTGTTCTGAGGGAAATAACAGATTTCTTGTATATGAATTTGTTTGCGATGGCTCACTTGATCAGCATTTATCGCAACATTCTAGAAAACCTCTTAATTGGCCAGCCAGGATCAAAGTGGCTATTGGAGCTGCAAAAGGCTTGTTGTATTTGCATGAGAATAATATAATACACAGAGATGTGAGACCAAGTAACATTCTTGTTACACATGATTATGAAGCAATGCTGGGAGATTTTGGACTGGCTAGAACTGAACAAATGGACTCAGTGTACTCAACAGATGTTGTTGGAACATTAGGGTATATGGCACCAGAATATGCAGAATCTGGTAAAGTATCAACTAAGTCAGATGTGTATTCTTTTGGAGTAGTGCTTCTTCAGTTAATAACAGGAATGAGGACAACAGACAAAAGGATTGGAAACAAAAGTCTTGTGGGATGGGCTAGGCCACTACTGAAGGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATACCTATGATTGTCATCAGCTTTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCACTAGGGATCCTCGAAAGCGATTATCAATGGATACAGTGGTTAGTGCATTAACTCATATAGTAGAAGGCAACACATGTAGCATGGTACTAAGAGACTGTTCACCAGCACGGTCAGATTCATCCTATGACATGTCAGAATCTCTTTTATCAGAAGATGTCTCTCCAGAATTAGAAGAAGAAGATGGAATCGTCTGTGTAGGATGTAACGCAATTAATTTACGACCTCCACCATCTCCTCCTTTAGGAAGTACTTCATGGAGTACAACAAGGCACAAGTATGTATATTCACAAGGCTGA 1905 0.3738 MMSDESQRVVVIHHASRDFSARALKWAINGFSLEHGDSLTLVSILHHVKSPTSAKFRAIFGSDQNIVYEEVAKKKEKMYNNACIKKIIDKCQTHKIQFLIEVLPGKLPELAIDAAIRLKATSVILDRDMKKYKKDFMQSLSCALLIIKRDNSIKHLKGPWKTMISFRGYDNETFEKCSESSPSLWSMTNAVFRSKSSCNLTKIVCHQIHCQIKQTPEDRDLDMARGYCLLPSAPEMYHNETKIGHISNHESYHIVEKFKNSVCSVCENKRPKFELMKEYTYVELHEATHGFSPKNYLSEGGFGSVYCGKLHGLKIAVKKHKFASLQGEKEFKSEVNALSKAIHENVVMLLGSCSEGNNRFLVYEFVCDGSLDQHLSQHSRKPLNWPARIKVAIGAAKGLLYLHENNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQMDSVYSTDVVGTLGYMAPEYAESGKVSTKSDVYSFGVVLLQLITGMRTTDKRIGNKSLVGWARPLLKERNYPDLIDERMMDTYDCHQLFWMIRLAEKCLTRDPRKRLSMDTVVSALTHIVEGNTCSMVLRDCSPARSDSSYDMSESLLSEDVSPELEEEDGIVCVGCNAINLRPPPSPPLGSTSWSTTRHKYVYSQG* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1546 634 Gene3D HUPs 1 150 IPR014729 -
Tpr7g1546 634 SUPERFAMILY Protein kinase-like (PK-like) 276 567 IPR011009 -
Tpr7g1546 634 ProSitePatterns Tyrosine protein kinases specific active-site signature. 407 419 IPR008266 GO:0004672|GO:0006468
Tpr7g1546 634 ProSiteProfiles Protein kinase domain profile. 291 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1546 634 SMART tyrkin_6 291 553 IPR020635 GO:0004713|GO:0006468
Tpr7g1546 634 PANTHER TYROSINE KINASE FAMILY PROTEIN 8 619 - -
Tpr7g1546 634 Gene3D Transferase(Phosphotransferase) domain 1 367 569 - -
Tpr7g1546 634 Pfam Protein tyrosine and serine/threonine kinase 295 553 IPR001245 GO:0004672|GO:0006468
Tpr7g1546 634 Gene3D Phosphorylase Kinase; domain 1 262 365 - -
Tpr7g1546 634 PANTHER OS01G0253100 PROTEIN 8 619 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1546 Tpr-Chr7 17386551 17391727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1546 279 567 Trihelix Transcription Factor Family AT5G38560 44.040 3.17e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr7g1546 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4802 3 52874464 52875897 Tpr7g1546 7 17386551 17391727 PCT