Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1544 ATGTATTCTCTTGTCTCTGGAGAGGAAGTTGCAGCCAAATTTACATCAAAAACAGAAGCTAGGAACTGTTATCCAGGATCACTAGATAACAGAAAAGTTGCAGGAAAGATTGTTATTTGTGTCAATGACGATCAAAATATTACACGGAATATGAAGAAGCTAATTGTACAAGATGCAGGAGCCATTGGAGTGATACTCATTGAGAAGGAAGACATAGATGTTCCCTTTGATGCAGGTCTATTTCCCTTCACAGAGGTTGGAAATCTTAAAGGGTATCAAATCCTTAAGTACCTAAAATCTACCAAGAAACCAACTGCAACTATTCTTCCAACAACAGAAGTTCATAGATATCGACCTGCACCAATTGTTGCATCTTTCTCATCGAGAGGTCCTTCAAGCCTTACTGAAAACATTCTCAAGCCGGATGTCATGGCTCCAGGAGTTTCGATATTGGCAGCTCTGATTCCTAAAAATGAAAATGTTCCAATTGGGAAAAAACCATCCATGTTTGGCTTAAAATCTGGTACATCAATGGCTTGTCCTCATGTATCTGGTGCTGCAGCATTTATCAAATCAGTACATAGAAGTTGGAGTCCTTCAATGATCAAATCAGCATTAATGACATCAGCTACAACCTACAATAACATGGGGAAGTCAGTAACCAATAGCTCAAACTACATTTCCAACCCACATGAAATGGGAGTCGGAGAAATTAATCCACTCAAAGCTCTCAACCCTGGTTTAGTCTTCGAAACAGATGTCGAAGACCACATTCGATTCCTTTGTTATTATGGCTATTCTAACAAAGACATAAGAAAAATGTCTAAGACTAATGTAACATGCCCAAGAACCTCACAAAGTCTTATATCCAATATAAATTACCCATCAATCTCTATACAAACACTTAAAAGAAATCAAAAAGTAAGAATAATCACAAGAACAGTGACGAATGTAGGAACCTTAAATGCTACATATGTTGCACAAGTGCATGCCCCTCAAGGATTGGTTGTTAAGGTCATCCCCAACAAACTTGTATTTTCAGAAAGTGTTCAAAAAATTACCTATAAAGTCTCATTCTATCCTAAGGAAGCTCATGGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTAGACATTATGTTCACACAGTATTTGCAGTTCAAGTTGAATAA 1176 0.3759 MYSLVSGEEVAAKFTSKTEARNCYPGSLDNRKVAGKIVICVNDDQNITRNMKKLIVQDAGAIGVILIEKEDIDVPFDAGLFPFTEVGNLKGYQILKYLKSTKKPTATILPTTEVHRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVSILAALIPKNENVPIGKKPSMFGLKSGTSMACPHVSGAAAFIKSVHRSWSPSMIKSALMTSATTYNNMGKSVTNSSNYISNPHEMGVGEINPLKALNPGLVFETDVEDHIRFLCYYGYSNKDIRKMSKTNVTCPRTSQSLISNINYPSISIQTLKRNQKVRIITRTVTNVGTLNATYVAQVHAPQGLVVKVIPNKLVFSESVQKITYKVSFYPKEAHGGYNFGSLTWLDGRHYVHTVFAVQVE* 392
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1544 391 ProSiteProfiles Serine proteases, subtilase domain profile. 1 244 - -
Tpr7g1544 391 Pfam PA domain 8 71 IPR003137 -
Tpr7g1544 391 Gene3D - 2 115 - -
Tpr7g1544 391 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 389 IPR045051 -
Tpr7g1544 391 CDD PA_subtilisin_like 1 108 - -
Tpr7g1544 391 Gene3D - 261 390 - -
Tpr7g1544 391 ProSitePatterns Serine proteases, subtilase family, serine active site. 175 185 IPR023828 -
Tpr7g1544 391 Pfam Subtilase family 112 215 IPR000209 GO:0006508|GO:0008236
Tpr7g1544 391 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 389 - -
Tpr7g1544 391 Gene3D Peptidase S8/S53 domain 116 256 IPR036852 GO:0004252|GO:0006508
Tpr7g1544 391 SUPERFAMILY Subtilisin-like 113 248 IPR036852 GO:0004252|GO:0006508
Tpr7g1544 391 Pfam Fibronectin type-III domain 291 388 IPR041469 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr7g1544 Tpr-Chr7 17366278 17368601 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1544 2 388 Subtilisin-like Serine Gene Family AT1G20150 40.201 1.71e-89 284