Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1542 ATGATGGAAAACAACAACACTGTTAATACTTCAGAATCAATTGATAAATCTAAGATTGTAGAAGTGAAACCCTTGCGTAGTTTAGCTCCTGTATTACCACCAAACAATGTTCAATCCTTTTTTAATGCTCAATACCCAAATGGGTTTTCACCATTTTGTTCATTTGTCAAACCCCAACAAATTCCTGTTACAAAAGAAACTGAGGAAATTCCTGTTGATTGCAATGCAACAGTAGATACTCCTGTTGTTCCGAAAGCGACACAAGAAACTCCTGTTGCTGCTAAGGTGACTCCAATTAGGTCATACAAGAGTTCACATGATGAAGAAGTGAATGTGAATCATCAAGGTGATGGAAATGCTGGTTCTGCTTGGGAAAGGTTTAATGGTGATGATTGGGGAGCGTGTAGTAGAAAGCGAGCTACACAGAATATAGAGAACTGTAAAGAGGTTCCTAAAAGGAAAAAGAAAAAGAAAACTCGGGAGCCATCCGTTGGTGGTTCGAGTTCTTATTTTGCTGCTTTCCCATATCTAAAAGAGGATGGTAATCGGGAATCAGTTGATTATGTGCTTATGACATTTGATTCGATTCGAAGAAAGCTCTGTCAACTTGAAGAATCGAAGGAATTTAGCAATGCACTTGCCAAGCATCTTAGAGCAAGTAATGCTTTGACGTGTCATGGGGTTAAAACAAACACGAGGAGAAGAGCAGGAGCGGTCCCTGGGATTGAGGTTGGGGATATTTTCTTTTTCCGAATGGAAATGTGTCTTGTGGGTTTACATGGTCAATCAATGGGTGGAATTGATTACATGAACATCAAGGATGGGTCTAAGGAGGATACTATGGCTTTGAGTGTTGTATCGTCAGGAGTGTATGGTGATGAATCAAAGGATAATGATGTTTTATATTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGAAAGAAGTGCGCAACGGCATGACGAAGTTAGAGTCATTCGAGGCTTGAGAGATACTGTGAATAGAAGTGCAAAAATCTATATGTATGATGGTTTGTATAAAATCGAAGAATCTTGGCTCGAAACGGAGAAATCTGGTGGTGGTGTGTTTAAATATAAGATGGTAAGGTTGCCTGGTCAAAAAAGTGCTTTTGCTTCTTGGATGTTGGCTCAAAAGTGGAAGGCAGATTCCTCTTCCAGGAATGGTTTTATTCTTCCTGACCTCTCCAACAAAATTGAAAGTATACCAGTATCACTTGTCAATGATGTTGATCATGAAAAGGGTCCTGCTTTTTTCACTTATTTCATGTCTCTCAAAAATCCGAAACCTTTTGGTTTAGTGCAGCCTTCTTTTGGCTGCAATTGTAAAGATTGTATCCCTGGTGATTTGAACTGTTCATGCATTCAAAGAAATGATGGCGATTTTGCTTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCACTGATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTAACTGCAAAAATCGAGTATCGCAGACAGGTTTAAAACAATACATGGAGGTGTTCAAAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGCGCTGGTACCTTTATTTGTGAGTATGCTGGAGAAGTTATTGACAGAGAAAGGGCATATCAAAACAGGGAAGGAGAAAATGATGAATATGTTTTCGATACAAGCCGTATTTATGTACCATTCACGTGGAATCATGATCCTAACTTATTGAAAGAAGTAGTTTCAACTGTTTCAAGGGAGGATTATACTATACCATCTCCTCTAATAATAAGTGCTAAGAATGTTGGAAATGTGGCTAGGTTCATGAACCATAGTTGCTCCCCAAATGTGTTTTGGCAGCCAGTTTTATATGGGGAAAATAATCAATCCGTTCTCCACATTGCATTTTTTGCCCTTAGGCATATTCCTCCAATGGCAGAGTTGACATATGATTATGGAGTTGTCCCTACTGGTCGTGGTGCACTCAGAAGCAGAAAGAAATGCTTGTGTGGATCGGAAAATTGCCGTAGTTTCTTTGGTTGA 2091 0.396 MMENNNTVNTSESIDKSKIVEVKPLRSLAPVLPPNNVQSFFNAQYPNGFSPFCSFVKPQQIPVTKETEEIPVDCNATVDTPVVPKATQETPVAAKVTPIRSYKSSHDEEVNVNHQGDGNAGSAWERFNGDDWGACSRKRATQNIENCKEVPKRKKKKKTREPSVGGSSSYFAAFPYLKEDGNRESVDYVLMTFDSIRRKLCQLEESKEFSNALAKHLRASNALTCHGVKTNTRRRAGAVPGIEVGDIFFFRMEMCLVGLHGQSMGGIDYMNIKDGSKEDTMALSVVSSGVYGDESKDNDVLYYSGQGENFNKKDKHVTDQKLQRGNLALERSAQRHDEVRVIRGLRDTVNRSAKIYMYDGLYKIEESWLETEKSGGGVFKYKMVRLPGQKSAFASWMLAQKWKADSSSRNGFILPDLSNKIESIPVSLVNDVDHEKGPAFFTYFMSLKNPKPFGLVQPSFGCNCKDCIPGDLNCSCIQRNDGDFAYTANSILVSRKPLIHECGPMCRCFPNCKNRVSQTGLKQYMEVFKTKGRGWGLRTLDPIRAGTFICEYAGEVIDRERAYQNREGENDEYVFDTSRIYVPFTWNHDPNLLKEVVSTVSREDYTIPSPLIISAKNVGNVARFMNHSCSPNVFWQPVLYGENNQSVLHIAFFALRHIPPMAELTYDYGVVPTGRGALRSRKKCLCGSENCRSFFG* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1542 696 SMART G9a_1 232 389 IPR003105 -
Tpr7g1542 696 Gene3D - 219 402 IPR036987 -
Tpr7g1542 696 SUPERFAMILY SET domain 423 692 IPR046341 -
Tpr7g1542 696 SUPERFAMILY PUA domain-like 222 407 IPR015947 -
Tpr7g1542 696 ProSiteProfiles SET domain profile. 523 669 IPR001214 GO:0005515
Tpr7g1542 696 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 694 - -
Tpr7g1542 696 Pfam SET domain 534 669 IPR001214 GO:0005515
Tpr7g1542 696 ProSiteProfiles Pre-SET domain profile. 460 520 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tpr7g1542 696 ProSiteProfiles YDG domain profile. 237 385 IPR003105 -
Tpr7g1542 696 ProSiteProfiles Post-SET domain profile. 680 696 IPR003616 -
Tpr7g1542 696 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 12 694 - -
Tpr7g1542 696 Pfam SAD/SRA domain 236 389 IPR003105 -
Tpr7g1542 696 Gene3D SET domain 406 695 IPR046341 -
Tpr7g1542 696 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 95 696 IPR025794 GO:0016571
Tpr7g1542 696 SMART set_7 523 675 IPR001214 GO:0005515
Tpr7g1542 696 Pfam Pre-SET motif 418 515 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tpr7g1542 696 SMART preset_2 414 507 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1542 Tpr-Chr7 17339556 17343285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1542 6 696 Su(var)3-9 homologs AT1G73100 49.153 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr7g1542 SAD_SRA 1.3e-45 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4808 3 52912665 52917499 Tpr7g1542 7 17339556 17343285 PCT