Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1536 ATGGATCATATGAACGTGCCTTTGTTGGAGAAGAAGCAATATTATAAGGACTGTCCTGGTTGTAAGGTGGAACAAGAAAATGAGCTTAATCAAGGGTTATCCATCCTAAAGCTTTTCATTATTTGGATGGTGGTGTTATCTTCTTCACTGCCTATAACATCACTCTTTCCATTCCTTTATTTTGTGGTAAGGGATTTCAATGTTGCAAAAGAAGAGGCTGATATTAGTTATTATGCCGGTTATCTGGGATCTTCATACATGCTTGCAAGATCTTTAACAGCTGTAATTTTGGGAATGGTTTCTGATCGATATGGTCGAAAACCTGTTATAATTCTTGGGATCATCTCAGTTGTCATCTTCAACACATTATTTGGCCTTAGTACGAGTTATTGGATGGCTATTATCACCAGATTTCTTCTTGGAAGTTTAAACGGTGTACTTGGACCAGTGAAGGCATATGCTAGTGAACTTTTTAGAGAAGAGCACCAAGCTATAGGTCTTTCTACTTGTAGTGCCGCTTGGGGCATTGGTTTAATTATTGGCCCAGCATTAGGAGGCTATTTGGCTCAGCCAGCAGAAAAATACCCACAAATATTTACAAAGGATTCATTTTGGGATAAGTTTCCATACTTCTTGCCCTGCTTTATAATATCAGGACTTGCCTTGATAGTAGCAATTGCCTGCATTTGGATTCCGGAAACAGTTCACAATTTTGATAGTAATGAGTCTACAGATGCTGATGTTTTAGAAAATGGAAGCAAAATAGTAGAAAAGGAAAAGAATGTTCAAAAGAATGAAAACCTCTTCAAGAATTGGCCTTTGATGTCATCTATCATTGCTTATTGTGTCTTCTCACTTCATGATGTTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTCCGAGGCTAGGGGGTTTGAGCTTTACAACAGACGATGTTGGTAATGTTCTTTCAATTTCAGGACTTGCACTTGTGATCTACCAACTTTTCATATACCCATCCGTAGAAAAAGCATGTGGACCTATCGCCTTTGCTCGCATCACAGGGATATTTTCCATACCAATTTTGCAAAGTTACCCTTTCATCGCAATGTTGTCGGGCATAAGCTTATACATAGTCATCAGTATTGCTTCCATCCTCAAGAATGTTATGTCTGTGACAATTATAACGGGTTTATTCCTAATACAAAACCGAGTAGTGGAACAACACCAAAGGGGTGCAGCTAATGGAATTTCTTTGACAGCTATGTCTCTATTTAATGCTATTGGTCCTGCTGCAGGTGGTACAATGTGA 1299 0.3872 MDHMNVPLLEKKQYYKDCPGCKVEQENELNQGLSILKLFIIWMVVLSSSLPITSLFPFLYFVVRDFNVAKEEADISYYAGYLGSSYMLARSLTAVILGMVSDRYGRKPVIILGIISVVIFNTLFGLSTSYWMAIITRFLLGSLNGVLGPVKAYASELFREEHQAIGLSTCSAAWGIGLIIGPALGGYLAQPAEKYPQIFTKDSFWDKFPYFLPCFIISGLALIVAIACIWIPETVHNFDSNESTDADVLENGSKIVEKEKNVQKNENLFKNWPLMSSIIAYCVFSLHDVAYQEVFSLWAVSPPRLGGLSFTTDDVGNVLSISGLALVIYQLFIYPSVEKACGPIAFARITGIFSIPILQSYPFIAMLSGISLYIVISIASILKNVMSVTIITGLFLIQNRVVEQHQRGAANGISLTAMSLFNAIGPAAGGTM* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1536 432 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 2 432 - -
Tpr7g1536 432 Gene3D MFS general substrate transporter like domains 36 432 IPR036259 -
Tpr7g1536 432 SUPERFAMILY MFS general substrate transporter 38 432 IPR036259 -
Tpr7g1536 432 PRINTS Tetracycline resistance protein signature 79 98 IPR001958 GO:0022857
Tpr7g1536 432 PRINTS Tetracycline resistance protein signature 110 134 IPR001958 GO:0022857
Tpr7g1536 432 PRINTS Tetracycline resistance protein signature 167 189 IPR001958 GO:0022857
Tpr7g1536 432 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 432 IPR020846 GO:0022857
Tpr7g1536 432 Pfam Major Facilitator Superfamily 41 426 IPR011701 GO:0022857|GO:0055085
Tpr7g1536 432 ProSitePatterns Sugar transport proteins signature 1. 97 113 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr7g1536 432 CDD MFS_SLC46_TetA_like 41 432 - -
Tpr7g1536 432 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 2 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1536 Tpr-Chr7 17242866 17254108 Dispersed/Tandem