Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1509 ATGTTCCAAGATCCTTCAATCAAGCTTTTTGGAAGTGATATTCAAATTCATATTCCCATTAACTCAACAGATTCACACTCTCAGATTTACTCTCTTCCACAACAACAACCCATCATTATCATGAATGGAATTGAAGAATCCTGTAATGCTGATGTTGGTGTTCCTTTGAGTGAAGTTTCTAGCAAACAAGCTAATGCATTTCCTCAAGAAGATGCTAATGCTTTTCCAAATATGTACGAAACTGGCACTTCGAAACCGGTGACCAAAGCAGTTCATAGAAATAATGAACACAGGACTGCCAAAAGAGATACTGACAATCAAGAGAAAGCTTTCAAGAAGCCAGACAAGGTTCTTCCGTGTCCTCGGTGCAATAGTTTGGAGACAAAGTTTTGCTATTTCAACAATTACAATGTTAATCAACCAAGACATTTCTGCAAAAAATGTCAGAGGTATTGGACAGCTGGTGGAGCAATTAGGAATGTTCCTATCGGAGCCGGTAAGCGTAGAAATAAGCATTCACCTTTGCAGAACTGTGAAGTTCCTGTTACCCTTGATGTTGTACCTGTCATACACACAGATTCCAACCCTGCTAGTCTCAATGAGGAAGTTCCTCTTAGTGAATCACTAGAAGTGTTAAATCTCAAGGGCCATCGAAAAATTGAAATCGACTTGTCCACTATCAAAGAGGATATTGATGAACCTTCTTGCTCTTCTGTAAAAGCTGCTGAATCCGGCAAAATGGAGTATTCAGAAAACGGAATAGAGCATGTTAGTTTGACAACTCAATACAATGGCTTAATTCCTTTACATGCACTTCATTATTATTCTGCTCCTCCATGGCAATGGAATCCATGTTGGAATCCTACGGCGTTTAAGCCTGATAACATAACTTCAACTCCTGCGAACATGATGGCAGTAGAAATACCGATGACACCTTCATCATATTGGAGTTGTATGCCAAATTGGGTTGGCCAAATGGAAGAATTTAATGGCATTCCATCGCCTTCATCTTCAGTTAGCAGCGGCACTTGTTCCGGTAATAGGTCACCAACTTTAGGAAAACATTGTAGAGATGGAAGTACACAAGAAAAAGATACAATGAAGCCGAATATTTGGGTGCCTAAAACTATCAGAATTAACGATCCAGAAGAGGCTGCTAAGAGTTCGATATGGTCAACTTTAGCAACAAAATCTAAACAGAACAAACCTGTTATGAAAGGAAGTGTTTTTAAATCATTTGAACCAAAGTCAAATGCAAGTTCTCGTGATTTAGACGATAATCAAATTCTAAGAGCAAACCCTGCTGCTTTCTCTCGCTCGGGATCTTTTCAGGAAAGCATGTAA 1344 0.3921 MFQDPSIKLFGSDIQIHIPINSTDSHSQIYSLPQQQPIIIMNGIEESCNADVGVPLSEVSSKQANAFPQEDANAFPNMYETGTSKPVTKAVHRNNEHRTAKRDTDNQEKAFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKKCQRYWTAGGAIRNVPIGAGKRRNKHSPLQNCEVPVTLDVVPVIHTDSNPASLNEEVPLSESLEVLNLKGHRKIEIDLSTIKEDIDEPSCSSVKAAESGKMEYSENGIEHVSLTTQYNGLIPLHALHYYSAPPWQWNPCWNPTAFKPDNITSTPANMMAVEIPMTPSSYWSCMPNWVGQMEEFNGIPSPSSSVSSGTCSGNRSPTLGKHCRDGSTQEKDTMKPNIWVPKTIRINDPEEAAKSSIWSTLATKSKQNKPVMKGSVFKSFEPKSNASSRDLDDNQILRANPAAFSRSGSFQESM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1509 447 MobiDBLite consensus disorder prediction 397 447 - -
Tpr7g1509 447 ProSitePatterns Zinc finger Dof-type signature. 120 156 IPR003851 GO:0003677|GO:0006355
Tpr7g1509 447 MobiDBLite consensus disorder prediction 413 447 - -
Tpr7g1509 447 ProSiteProfiles Zinc finger Dof-type profile. 118 172 IPR003851 GO:0003677|GO:0006355
Tpr7g1509 447 PANTHER CYCLIC DOF FACTOR 2 7 447 IPR045174 GO:0003700|GO:0006355
Tpr7g1509 447 MobiDBLite consensus disorder prediction 90 110 - -
Tpr7g1509 447 Pfam Dof domain, zinc finger 115 172 IPR003851 GO:0003677|GO:0006355
Tpr7g1509 447 MobiDBLite consensus disorder prediction 89 110 - -
Tpr7g1509 447 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 7 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1509 Tpr-Chr7 16805470 16808480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1509 87 446 C2C2-Dof Transcription Factor Family AT5G39660 38.601 7.15e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr7g1509 zf-Dof 2.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1509 - - cam:101489693 635.565