LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1508	ATGGCAAAAAAACACCTACTCCTTCTAATCTTGTTCCTTTCCATCATCAATCTTTCACAACAGTTACAATATTCTCAATCTCAAACACTTCTCAAACTTCAACAACTTCTTGGCTACCCTTCAACATTAACAACCTTAAGCAGCACCAAAGATTTATGCAACATTGAACCTACTCAATATTTGACACTGGTGTGCTATGAAGACAATTTAACACAGTTGCATGTTGTTGGAAACAAAAATGAGTTCACCACATTACCTCAAGACTTCAACTCATACACACTTTTTTCAACACTTTCCACTCTTTCAAGCTTGAAAGTTCTCTCTTTAGTTTCTCTTGGTTTATGGGGTCCTTTACCTGAAACCATAGCTCAATTATCTTCATTGGAAATACTAAACATTACTTCAAATTATTTCAGTGGAGTTATACCATTTCACCTTTCATATCTTAATAATCTTCAATCATTAGTACTTGATGATAATAATTTCAATGGTGAAATTCCAAACTTAGGTTCACTTCAAGGTTTGGTTGTGCTTAGTATGAAGAAAAATTTCCTTAGTGGCAACTTACCAAATTCATTGAATGAACTTGTTACTCTTAGAGTTTTAGATCTATCAAATAATCAATTATTTGGTGAATTACCTCATCTTCATAATTTGGTTAATCTCCAAGTTCTTCACTTAGAAAATAACACATTAGGACCTCACTTTCCTTCTCTTCCTACAAAGTTAGTTTCACTTGTGATGAGAAACAATAGTTTTCGACTCGGTGTACCTTCTAATATAAGTTCTTTCTATCAACTTCAAAAGTTGGACCTTTCTTTGAATGGTTTTGTCGGGCCTTTTCCGCCGTCTTTATTGTCATTACCTTCTATCAACTACCTTGATGTTTCTTCAAATAAGTTCACTGGTATGCTTTTCAAGAATTTTTCATGCAATGATGATCTTCATTTTGTGAATTTGTCTTCAAATTATTTGAAAGGTGAACTACCTAGTTGTTTGAGACCAAAGAAAACAAAGGTTATTTTGTATGGTGGAAATTGTTTATCAAATGTGAAACAAAATCAACATAGTTATAGTTTCTGCAGCAATGAAGCTTTAGCAGTGAATATCACTCCTCATCAAGAACAGAAACATAAGGGAACAGCAAATAAAACAGTATTTGTATCATCAAGTTTAGGAGTTGTTGGAGTATTGATTGTTGCAGTTGTTATCTTTGTTGTTAATGAAGTTCATAAGAAAAGTGTTATGAAAAAAACTTCAATGTCTACATTGGAGGATGTTATACAGAATGAAGATAAAGAGAAAACTACTGCAAGGTCTATAGTGGAGCATATCATCAAGAAGGTTCCTGATAAAGAAGCTGTTAAAACACTGACAAAATCCATAAAGGAACAGATAGTGATCCGAGTCGGTAATAGGCGCCATGTGAGGAGGCCTTCGAGGTCCATCATTGAACATGTATCATCAGTAAACACTGCAAAATTACTCACAGATGCAAGGTGTATATCTGAAACAATGAAGATGGGAACTGGTCTTCCTGCTTATAGGACATTTGCTTTGGACCAACTTAAGGAAGCTACAAATAATTTTGATGAATCAAGTCTCATAAGTGAAGGTCCACTTGGTCAGATATATAATGGGGTTCTTTCTGATGGGATGAATATTACTATTAGAGGAATGAAGATAAGAAAGAAACACAGCCCTCAGGCCTATATGCACCATGTTGAGTTGATTTCAAAACTTAGGCATTCACACTTGGTTAGTTCACTTGGTCATTCTTTTGATTGCAACCAAGAAGATTCAAGTGTCAACACTATATTTCTCATATTTGAGTTTGTTCAAGACAAAAGTTTAAGAAGCCGCGTCTCTGTATCAAATGGAGAAAGGCTTTGTTGGACACAAAGAATAGCAGCCACTATCGGAGTTGTGAAAGGCGTTCAATTTTTGCATACTGGGATAGTGCCTGGATTGTATTCAAATAATCTCAAGATAACTGATATTCTTTTGGATAACAATCATAATGTGAAAATAAGCAGTTATAATCTGCCAATCTATGCTGAAAACAAAAGAATGGTCAACAATGGAACTTCTGTTGGAGTAAAAGGAAATCTCCAAGCAAGGATAAATGATGGAGACAAGAATGATGTGTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGACGACCAATAATGTTCCACAATGAAGTTGGAATATTAAAAGATCTTTTGCATGTAAGCATCAAAACCGACGATATAGCTAGAAGGAGTATTGTTGATCCATTTGTTCACAAGGAATGTTCAGATGAATCATTAATGAAAATGATGGAGATATGTGTAAGGTGTCTCTCTAGTGAACCAAATGAAAGACCTTCTGTGGAAGATATCCTTTGGAATTTGCAATTTGCAGCACAAGTTCAGAATTCATGGAAAAGAGAAACAAATGATCATAGAGACTCACCTAAATCATCCTCAAGAGAGACATAA	2490	0.347	MAKKHLLLLILFLSIINLSQQLQYSQSQTLLKLQQLLGYPSTLTTLSSTKDLCNIEPTQYLTLVCYEDNLTQLHVVGNKNEFTTLPQDFNSYTLFSTLSTLSSLKVLSLVSLGLWGPLPETIAQLSSLEILNITSNYFSGVIPFHLSYLNNLQSLVLDDNNFNGEIPNLGSLQGLVVLSMKKNFLSGNLPNSLNELVTLRVLDLSNNQLFGELPHLHNLVNLQVLHLENNTLGPHFPSLPTKLVSLVMRNNSFRLGVPSNISSFYQLQKLDLSLNGFVGPFPPSLLSLPSINYLDVSSNKFTGMLFKNFSCNDDLHFVNLSSNYLKGELPSCLRPKKTKVILYGGNCLSNVKQNQHSYSFCSNEALAVNITPHQEQKHKGTANKTVFVSSSLGVVGVLIVAVVIFVVNEVHKKSVMKKTSMSTLEDVIQNEDKEKTTARSIVEHIIKKVPDKEAVKTLTKSIKEQIVIRVGNRRHVRRPSRSIIEHVSSVNTAKLLTDARCISETMKMGTGLPAYRTFALDQLKEATNNFDESSLISEGPLGQIYNGVLSDGMNITIRGMKIRKKHSPQAYMHHVELISKLRHSHLVSSLGHSFDCNQEDSSVNTIFLIFEFVQDKSLRSRVSVSNGERLCWTQRIAATIGVVKGVQFLHTGIVPGLYSNNLKITDILLDNNHNVKISSYNLPIYAENKRMVNNGTSVGVKGNLQARINDGDKNDVYDIGVILLEIILGRPIMFHNEVGILKDLLHVSIKTDDIARRSIVDPFVHKECSDESLMKMMEICVRCLSSEPNERPSVEDILWNLQFAAQVQNSWKRETNDHRDSPKSSSRET*	830

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g1508	829	ProSiteProfiles	Leucine-rich repeat profile.	151	173	IPR001611	GO:0005515
	Tpr7g1508	829	Pfam	Protein tyrosine and serine/threonine kinase	535	799	IPR001245	GO:0004672\|GO:0006468
	Tpr7g1508	829	Gene3D	Phosphorylase Kinase; domain 1	492	612	-	-
	Tpr7g1508	829	SUPERFAMILY	L domain-like	79	348	-	-
	Tpr7g1508	829	SUPERFAMILY	Protein kinase-like (PK-like)	510	803	IPR011009	-
	Tpr7g1508	829	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	467	818	-	-
	Tpr7g1508	829	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	7	407	-	-
	Tpr7g1508	829	MobiDBLite	consensus disorder prediction	812	829	-	-
	Tpr7g1508	829	ProSiteProfiles	Leucine-rich repeat profile.	198	220	IPR001611	GO:0005515
	Tpr7g1508	829	PANTHER	INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	7	407	-	-
	Tpr7g1508	829	PANTHER	INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	467	818	-	-
	Tpr7g1508	829	Gene3D	Ribonuclease Inhibitor	23	242	IPR032675	-
	Tpr7g1508	829	Gene3D	Ribonuclease Inhibitor	243	374	IPR032675	-
	Tpr7g1508	829	Gene3D	Transferase(Phosphotransferase) domain 1	614	827	-	-
	Tpr7g1508	829	ProSiteProfiles	Protein kinase domain profile.	530	803	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr7g1508	829	MobiDBLite	consensus disorder prediction	810	829	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1508	Tpr-Chr7	16798143	16803320	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1508	39	826	Miscellaneous Gene Families	AT3G03770	48.561	0.0	681

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Tpr7g1508		PK_Tyr_Ser-Thr	2.3e-14	CL0016