Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1507 ATGGCTCTCTCTTCTCCTCAACTTTCCCTATTTCCATTCTCTCGTTTAACCCAATTCAACACTTGTTGTTCTTACACTTTCATCACCCACACTTCCCAAACCGTTACTTCACGCCAATTTATTCGCAACAACTTCTCTCTTTCTCTCACAAAACAACAACCAACTCCATCCTTCATAATAACCGCTTCTTCTTCCACTAAAACTCTTCCCATGCTTGCTCCTTACAATGTTTTGATTACTGGCTCAACCAAAGGGATTGGGTATGCTTTAGCAAAAGAGTTTTTAAAAGCAGGGGACAATGTCTTGATTTGCTCTAGATCAGATGAAAGGGTAGAGACTGCTGTCAAGGGCTTGAGAGAAGAATTTGGGGAGCAGCATGTGTGGGGCACTCCATGTGATGTCAGAAACGGAGAGGATGTGAAGAAATTAGTTTCGTTTGCTAAAGAAAAACTGAAATACATTGATATATGGATCAATAATGCTGGATCGAATGCATATAGCTACAAGCCACTTGCTGAAGCATCAGATGAGGATCTTATTGAGGTGGTTACAACAAACACACTTGGCTTGATGATATGCTGTCGAGAGGCAATAAAGCTGATGGGGAACCAACCTCGCGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCATTTAACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTGAAAAATGTCATGGTTCACAATCTTTCGCCAGGGATGGTTACAACGGATCTTCTCATGTCTGGCGCCAATACAAAACAGGCAAAGTTTTTCATAAATGTCTTGGCTGAACCAGCTGAAGTGGTTGCAGAATACTTAGTTCCAAACATTAGATCTATCCCTACCAACAGATCAATGAAGCCAACATACATCCGATTCCTCACGGGATTGAAAGCCTATTCCCAAATATTCTCAAGATTTGCATTTGGGGCAAGGAGGAACCGGTACATCATTGAAGATTGA 1035 0.4184 MALSSPQLSLFPFSRLTQFNTCCSYTFITHTSQTVTSRQFIRNNFSLSLTKQQPTPSFIITASSSTKTLPMLAPYNVLITGSTKGIGYALAKEFLKAGDNVLICSRSDERVETAVKGLREEFGEQHVWGTPCDVRNGEDVKKLVSFAKEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKLMGNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPAEVVAEYLVPNIRSIPTNRSMKPTYIRFLTGLKAYSQIFSRFAFGARRNRYIIED* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1507 344 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 28 344 - -
Tpr7g1507 344 CDD SDR_c 77 298 - -
Tpr7g1507 344 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 163 IPR002347 -
Tpr7g1507 344 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 216 IPR002347 -
Tpr7g1507 344 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 229 248 IPR002347 -
Tpr7g1507 344 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 28 344 - -
Tpr7g1507 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 70 297 IPR036291 -
Tpr7g1507 344 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 216 244 IPR020904 GO:0016491
Tpr7g1507 344 Gene3D - 70 315 - -
Tpr7g1507 344 Pfam short chain dehydrogenase 77 272 IPR002347 -
Tpr7g1507 344 PRINTS Glucose/ribitol dehydrogenase family signature 76 93 IPR002347 -
Tpr7g1507 344 PRINTS Glucose/ribitol dehydrogenase family signature 152 163 IPR002347 -
Tpr7g1507 344 PRINTS Glucose/ribitol dehydrogenase family signature 229 248 IPR002347 -
Tpr7g1507 344 PRINTS Glucose/ribitol dehydrogenase family signature 253 270 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1507 Tpr-Chr7 16785641 16793226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1507 42 269 Acyl Lipid Metabolism Gene Families AT1G24360 30.472 5.34e-18 81.6