Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1504 ATGAACACATCCATAATCGATCCGTTGCAGGGTGATTTTCCTGAAGTTATAGAAGAGTATCTTGAACATGGGGTTATGAAATGTATTGCTTTCAATCGTCGCGGTACCCTTCTTGCTGCTGGCTGCAATGATGGAAGTTGTGTTATCTGGGATTTTGAAACCAGGGGCATTGCTAAAGAGCTTCGAGATAATGATTGTTCCTCTCCCATTACCAGTATATGTTGGTCAAAGTGTGGTAATCGAATTCTGGTATCTGCTGCTGACAAGTTGTTATCCCTGTGGGATGTTTTGAGTGGTAAGAGGATAACAAGAATAGTTTTGCAGCAAACCCCTTTACAAGCTCGTCTCCATCCAGGGTCCTCCAAACCATCTATCTGCTTGGCGTGTCCTCTCTCATGTACTCCAATGATTGTTGACTTAAACACCAAAGATACAACTTATCTTCAAGTTTCTGTCTCTGAGAAACCAACTGAACCAAACCCTGCCTCACGTAACAAGTGTTCTGATGGAAGTACATCTTTCACGCCTACTGCAGCATGTTTTAGTAAGCATGGAAACCTGGTTTACGTGGGAAACTCAAAAGGGGAAATTCTTGTAATTGACAGTAAAGATGGTGAGGTGCGTGCCATGGTTCCCATCTCTGGTGGTTCAGTAGTGAAGAACATTGTATTCAGCAGGAACGGACAATATCTTCTAACGAACTCAAATGATCGAGTTATCAGGATCTATGAAAATCTTCTTCCCCCAAAAGATGAAATTAGAGCACTAAATGAACTGAATGAGAGCCTCAGTAATCTAAATGGTGTTGAGAAGTTGACGGCTCTAGGATCAAAATGTTTAACTTTGTTCCGTGAGTTTCAAGATGCAATCACAAAGGTGCACTGGAAAGCACCCTGTTTCAGTGGTGATGGTGAGTGGGTTATTGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAGCTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTAGCATGGCATCCTGTACGTCCAATTGTCGTATCTGTTTCTTTGAATGGCATAGTTTATATCTGGGCCAAAGATTACACTGAGAACTGGAGTGCTTTTGCTCCTGATTTCAAAGAGCTTGAGGAAAACGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGGTTCCCGAGTCTGAGAAGGTAAAAGGATCCGATGTCAATGAAGATGAGGAAATTGACATTGTGACAGTGGAGAAGGATCCTGCTTTCAGTGACTCTGATATGTCCCAGGAAGAGTTATGTTTCCTTCCAGCATCTCCCTGTCGTGATGTTCCTGAACAGCAAGACAAGTTCTTAGAAAGTTCTTCAAAGCTGGCGGACAGCAATAACTCTGAATCAACATTTTCAGAAGAAACTGGAGCAAATGGACATATGATGAATCATGCCTCAAGTCCAGTTGAAGATGATGCTGTTGGAACACGAATTAAAAGAAAGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAGGTCAAGAAACCCTCAAAATCCAGCAAATCGTCAAAAACCAAAAGTAAATCTTTGTTTGATGAGAGTAATGGTAATGGTTTTTATTATGATGAGCTTTCTGACGAGTAA 1650 0.4182 MNTSIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCNDGSCVIWDFETRGIAKELRDNDCSSPITSICWSKCGNRILVSAADKLLSLWDVLSGKRITRIVLQQTPLQARLHPGSSKPSICLACPLSCTPMIVDLNTKDTTYLQVSVSEKPTEPNPASRNKCSDGSTSFTPTAACFSKHGNLVYVGNSKGEILVIDSKDGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEIRALNELNESLSNLNGVEKLTALGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVIGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLVPESEKVKGSDVNEDEEIDIVTVEKDPAFSDSDMSQEELCFLPASPCRDVPEQQDKFLESSSKLADSNNSESTFSEETGANGHMMNHASSPVEDDAVGTRIKRKRKPSEKVLELQAEKVKKPSKSSKSSKTKSKSLFDESNGNGFYYDELSDE* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1504 549 MobiDBLite consensus disorder prediction 492 520 - -
Tpr7g1504 549 SUPERFAMILY WD40 repeat-like 24 363 IPR036322 GO:0005515
Tpr7g1504 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 104 IPR001680 GO:0005515
Tpr7g1504 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Tpr7g1504 549 SMART WD40_4 161 201 IPR001680 GO:0005515
Tpr7g1504 549 SMART WD40_4 325 364 IPR001680 GO:0005515
Tpr7g1504 549 SMART WD40_4 13 51 IPR001680 GO:0005515
Tpr7g1504 549 SMART WD40_4 54 95 IPR001680 GO:0005515
Tpr7g1504 549 SMART WD40_4 204 244 IPR001680 GO:0005515
Tpr7g1504 549 SMART WD40_4 276 323 IPR001680 GO:0005515
Tpr7g1504 549 Gene3D - 128 377 IPR015943 GO:0005515
Tpr7g1504 549 MobiDBLite consensus disorder prediction 453 481 - -
Tpr7g1504 549 MobiDBLite consensus disorder prediction 450 534 - -
Tpr7g1504 549 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Tpr7g1504 549 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Tpr7g1504 549 Pfam WD domain, G-beta repeat 279 323 IPR001680 GO:0005515
Tpr7g1504 549 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 1 530 IPR037850 GO:0048188
Tpr7g1504 549 ProSitePatterns Trp-Asp (WD) repeats signature. 38 52 IPR019775 -
Tpr7g1504 549 Gene3D - 14 127 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1504 Tpr-Chr7 16753340 16758512 Dispersed