Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1447 ATGATTACTAATGGGACAACCATGGATCCAAATTGTTTCCTCAAGCTCATATTGGTACTAATAATACTCCTCCTAGGGTTTCTTGCTTGGCTTGAAAACAAAAGAACAAACTCAAATAACAAAAGGGAAGAGATAGTGCAAGTTAGTGATGAAATAAATCTATTGTTTGAACAAGATCATGAGGACAACATAATATCCATTGGCTTAAGTGAATATTGTGTTTGCTCCTTTTGTGGCAAATTAAGCAACATAATCACAAGATGCTCTCGATGCAAAAATTATACATATTGCTCAAAAGAATGCCATGTGATGCACTGGACATGTTGGCATAGAGACGAATGTTTTGAGGAAACCTCTAATTACTCATTCAATGATGATGATGAGCAAAAACCATATGAAGGAGATGTTTATTATATTGAAGGAGGAGAAGATAGTGATGAGTCAAATAAAGAAATAACAAGGGGGCTAATTCAGCATGATGGCATTTTCAGTAATAACAGTGATAACTGTGCAGTTTGTGGTAATCCATGCTCCAAAAAATGCTCAAGATGCAAAGCTATAAAATACTGCTCACAAACATGTCAACATTTTGATTGGAAATCCGGGCATAAATTTCAATGTTGTGTTAAGATGAAAAGTTCAACTCAAGTAGCAACAAGCAATCAAGAATGGCCCGTTGGTGAAAATGTTATAATGCCTCCAAATCTAGATGAAGTGGCATATACTGATCATTCATATGACACTCTTTGCTTGGAATTTCATTCAGAAGAAAACACCAAGGCTCTCATTTTAAGTTCACAGGAAGCTAACAACAACGTAGAAGAGGTTGAAGAAAAAATGAGAAACTTAAAAGAAGAATTGGAGATGATCAGAAATGAAAATATAACACTGCAAGCAAAGCTTGAGTATTGGGAAATTAGAGCAAAGTATTCCGCTGATAGACTTTACAGTTTCAAGAAAGAGAATCAGCACCAGTTGTTAATATTGAAGCATGAAAATGAGTTGACATCAAATGCAGAGAAACAAGCACGTCAAATGGTTACTAATTTATCTCAGAGATTACACTGTTTGCAGATTTCAATTGAAACTGGAGTAGCAGAGAGGAAAAAACAGGAAGAATTTATATATATGCTACAGAATGAATGTACAAAGGCTAAGAGAGATTTTCAAGAACAAAACAAGTATGTTGAAAGGCTTAGACAGAAGCTTGATGATGCAACTCAATTTCCTATGAGAATAGCTGAAGAAACAAGACAAAAGTTAGCCATTACTTCCAATGCAATTTTTGCTAATGAATTCAAGCCTGCCGTTGAGGTGTCCAAGACAATCAGTTTAAGCAGAAACCCAACCTTGACTAGTCAGTGTTGTACAATTTGCTTAAGCAATGAGAAGGACTTGGCCTTCGATTGTGGGCACATGACTTGCAAAGAGTGCGGATATAAAATTCGCAAGTGTCATATATGTCGAAAGAAGATTGCTAATCGTATCAGGTTGTTCCCGGGGTGA 1506 0.3599 MITNGTTMDPNCFLKLILVLIILLLGFLAWLENKRTNSNNKREEIVQVSDEINLLFEQDHEDNIISIGLSEYCVCSFCGKLSNIITRCSRCKNYTYCSKECHVMHWTCWHRDECFEETSNYSFNDDDEQKPYEGDVYYIEGGEDSDESNKEITRGLIQHDGIFSNNSDNCAVCGNPCSKKCSRCKAIKYCSQTCQHFDWKSGHKFQCCVKMKSSTQVATSNQEWPVGENVIMPPNLDEVAYTDHSYDTLCLEFHSEENTKALILSSQEANNNVEEVEEKMRNLKEELEMIRNENITLQAKLEYWEIRAKYSADRLYSFKKENQHQLLILKHENELTSNAEKQARQMVTNLSQRLHCLQISIETGVAERKKQEEFIYMLQNECTKAKRDFQEQNKYVERLRQKLDDATQFPMRIAEETRQKLAITSNAIFANEFKPAVEVSKTISLSRNPTLTSQCCTICLSNEKDLAFDCGHMTCKECGYKIRKCHICRKKIANRIRLFPG* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1447 501 SUPERFAMILY HIT/MYND zinc finger-like 167 210 - -
Tpr7g1447 501 ProSiteProfiles Zinc finger RING-type profile. 456 489 IPR001841 -
Tpr7g1447 501 ProSiteProfiles Zinc finger MYND-type profile. 75 114 IPR002893 -
Tpr7g1447 501 Gene3D - 68 120 - -
Tpr7g1447 501 PANTHER OS06G0252500 PROTEIN 73 499 - -
Tpr7g1447 501 SUPERFAMILY HIT/MYND zinc finger-like 72 115 - -
Tpr7g1447 501 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 445 500 IPR013083 -
Tpr7g1447 501 Coils Coil 31 51 - -
Tpr7g1447 501 ProSiteProfiles Zinc finger MYND-type profile. 170 207 IPR002893 -
Tpr7g1447 501 Pfam MYND finger 75 114 IPR002893 -
Tpr7g1447 501 Pfam MYND finger 170 207 IPR002893 -
Tpr7g1447 501 Gene3D - 162 214 - -
Tpr7g1447 501 Coils Coil 259 300 - -
Tpr7g1447 501 PANTHER CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING 73 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1447 Tpr-Chr7 15931995 15940057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1447 166 207 Miscellaneous Gene Families AT4G31670 54.762 3.12e-10 60.8