Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1438 ATGAAGCAGTTACTGACAAAGTCCCTATCGGTTTGTTCTTTGCCAACCACTCTTCAACAACTTGCTTCCCATCAACCCAAAGGTGTTGCAAAGGTTGTACTAAAGAAAGGGAAGACCCAACTCTTTAAAGATGGCAACCCAATGGTATACAGTGGAGCCGTTGATAGAATTATCGGTAGGCCGCCTCCTAAGACTGGCGATATTGTTTTGGTATCAGATGGCACGGAGAAACCAATAGGGTGGGGCTTGTACAACTCGGTTTCTATGTTTTCTGTTCGTCTCATGCAGCTTCAAGACGAAGCAACCAGTGATTCAGCATGTGCATTAAACATGGAGAAACTGCTTGAAACAAGAATTGATTCTGCTGTTGAATTGCGTACAAGGTTGGGTCTTCCTTCTGTCCATACGAATGCGTATCGTCTAATCAATAGTGAGGGTGACAGATTATCAGGATTGATAGTTGATGTATTTGGAGATGTAGCTGTAGTAGCATCATCTGCTGCTTGGGTTGAGAAGTACAAATCAGAGATAGAGGCATGTATCCGGAAAATCAATTATATCAATCATATAAATTGGAGACCGTCTATTGATATTTTAAAGGAAGATGGAGTTAATGTGTCTGATTCAAAAGAATTGCTTTCATCTACTTGTCCTGAAAGAACAAAGATTATGGAAAATGGAATTGTGTACACGATTTCACTGAAAGGACAGAAGACAGGATTCTACGCAGATCAGCGCGAGAATCGTCAGTTCATATCGGGAATTTCAGATGGCCGAAAGGTTCTTGATCTTTGTTGCTATAGTGGTGGTTTTTCTCTAAATGCAGTGCGTGGAGGTGCTCTAAATGTCACTGGTGTTGACTCATCGCTGCCAGCTCTGGAGCTTGCTAAAGAAAATGTTGTACTTAACAACATTGATCCTGGAAGAATATCCTTTTTGAAAGAAGATGCAACTGAATTCATGAAGGGTGCTCTTCTGAGAAATGAATCTTGGGATATTGTCATCATTGATCCTCCTAAACTGGCTCCTTCAAAAAAGGTTCTACATGGTGCGTCTGGTATGTACAGAAATTTGAATTCATTGGCCATGCAACTTACAAAAAGAGGCGGTCTTCTGATGACCTGTTCCTGTTCTGGAGCTGTGACCCAGAGCGGAATTTTCCCGCGTATCCTACAGAGTGCAGCATCTATGGCAAAGAGAAAAATCACTGTTCTAAGAGATGCTGGAGCTGCCTGTGATCATCCTATTGATCCATCGTACCCAGAAGGCACATACCTAACCAACATTCTATTGAGAGTTTCATGA 1305 0.4184 MKQLLTKSLSVCSLPTTLQQLASHQPKGVAKVVLKKGKTQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVLVSDGTEKPIGWGLYNSVSMFSVRLMQLQDEATSDSACALNMEKLLETRIDSAVELRTRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDVAVVASSAAWVEKYKSEIEACIRKINYINHINWRPSIDILKEDGVNVSDSKELLSSTCPERTKIMENGIVYTISLKGQKTGFYADQRENRQFISGISDGRKVLDLCCYSGGFSLNAVRGGALNVTGVDSSLPALELAKENVVLNNIDPGRISFLKEDATEFMKGALLRNESWDIVIIDPPKLAPSKKVLHGASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFPRILQSAASMAKRKITVLRDAGAACDHPIDPSYPEGTYLTNILLRVS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1438 434 SMART pua_5 30 124 IPR002478 GO:0003723
Tpr7g1438 434 Pfam PUA-like domain 32 95 IPR041532 -
Tpr7g1438 434 SUPERFAMILY PUA domain-like 31 99 IPR015947 -
Tpr7g1438 434 CDD AdoMet_MTases 260 375 - -
Tpr7g1438 434 CDD RlmI_M_like 114 203 - -
Tpr7g1438 434 Gene3D Vaccinia Virus protein VP39 221 434 IPR029063 -
Tpr7g1438 434 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 18 433 - -
Tpr7g1438 434 Gene3D RNA methyltransferase domain (HRMD) like 111 219 - -
Tpr7g1438 434 Pfam S-adenosylmethionine-dependent methyltransferase 209 397 IPR019614 GO:0008168
Tpr7g1438 434 Gene3D PUA domain 29 100 IPR036974 GO:0003723
Tpr7g1438 434 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 429 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1438 Tpr-Chr7 15749652 15756607 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1438 7 15749652 15756607 Tpr7g1438 7 15749652 15756607 ECH