Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1436 ATGGAAGCAAAACAGCGCTTAAACCCCACAACGACAATGACAACAAACAAGAAGAAGAAAATCAACCAAACCCCAGAGAACAAGTTCCAATTCGAGCTAAATTCATGTTCCAAATCAAAGAACTTCCGCGGCGCGATTTCTCTGTACGATGATGCCGTTTCAAATAAAACTCGTCTCAACCAACACCACCTCAATGCACTTCTCTACCTCTGTTCCAACGCAGTCACAAACCCTTCCCTCAAACACCTCGCCTTAGATTATGGCTTTCGCATATTCAACCACATGTCATCCCTAAATATCACTCCTAACGAAGCCACTGTTGCCACTGTCGCTAGACTTGCCGCTGCTAACGGTGATGGTGACCGTGCATTTGAATTGGTAAAAGACATTGGTAAGTACAATGTTTCCCCTAGGTTAAGGACATATGATCCCGCATTGTTCTGCTTTTGTGAATTTCTTGATGCTGATAAAGCCTATGAGGTTGAGGAGCATATGAATAGTGTTGGGGTTAGTTTGGAGGAACCAGAAATTGCGGCACTTTTAAAGGTTAGTGTGAAGAAGGGTAGAGCTGATAGGGTTTATAAGTATCTTCACAAGCTAAGAAGCGGTGTGAGGTGTATAGGGGAATCGACGGCAACAATTATTGAGGAGTGGTTTCAGAGCAGCGAGGCGCGTGAGGTTGGTGAGGAGAATTTGGATGCAAGGATGGTCAGAGAGGGGGTTTTGAGGAATGGAGGAGGGTGGCATGGTTTGGGGTGGGTTGGAAAAGGGGATTGGGTTGTATCTAAAACAAGGGTTGATGGTGATGGGATTTGTTGTGGATGTGGTGAGCAATTGGTTTGTGTGGATATTGATGATGAAGAGATGGAGAAATTTGCTTTGTCTATTGCTGCATTGGCCGTGGAGCGTGAGGTCAAGGCAAATTTTAGTGAATTTCAGGGGTGGCTTGAGAAACATGACTGTTATGAAGCCATAGTGGATGGTGCAAATATTGGGCTCTACCAGCAAAATTTTGCTAATGGCGGATTTAGTATTAATCAGCTTGATGATGTTGTGAAAGAATTGTACAATCGAAGTGGGAAAAAATGGCCGCTAGTTATCTTACACAACAAGCGTGTGAGAGGGCTGATGGAAAATCCTTCCAGCAGAATATTGGTAGAGGAGTGGATGAAAAATGGTGTACTATATACAACTCCAAATGGATCGAATGATGACTGGTATTGGCTCTATGCTGCCATAAAACTCAGGTGCTTGCTTGTGACAAATGATGAAATGCGAGATCACATATTTGAACTCATAGGAAGCAACTTTTTTAATCAGTGGAAAGAAAGACATCAAGTACACTACACTTTTGTTAAGGGGAACTTGAAACTTCAGATGCCACCATCATATTCATTGGTTATCCAGGAATCAGAAAAAGGATCATGGCACGTGCCATTGGCACTGGGCACTAGCAACGAGTCTTCTAGACCTTGGCTCTGCATTACACGGAAAAGTGCGGATAATAATGTTGCTACTGTTTCTAACGGTGTGGCTACTTCTGGAAATGGTGATCTGGACCAGCCACAGAAATTAGCAGACAATGTTCGTAGCTTAGATTCCCAAGTCATTGATAATAACAGTACTTCCATCACTGGTAAAAGAAAAGAGAGGTCTGAACCTTCATGA 1668 0.4317 MEAKQRLNPTTTMTTNKKKKINQTPENKFQFELNSCSKSKNFRGAISLYDDAVSNKTRLNQHHLNALLYLCSNAVTNPSLKHLALDYGFRIFNHMSSLNITPNEATVATVARLAAANGDGDRAFELVKDIGKYNVSPRLRTYDPALFCFCEFLDADKAYEVEEHMNSVGVSLEEPEIAALLKVSVKKGRADRVYKYLHKLRSGVRCIGESTATIIEEWFQSSEAREVGEENLDARMVREGVLRNGGGWHGLGWVGKGDWVVSKTRVDGDGICCGCGEQLVCVDIDDEEMEKFALSIAALAVEREVKANFSEFQGWLEKHDCYEAIVDGANIGLYQQNFANGGFSINQLDDVVKELYNRSGKKWPLVILHNKRVRGLMENPSSRILVEEWMKNGVLYTTPNGSNDDWYWLYAAIKLRCLLVTNDEMRDHIFELIGSNFFNQWKERHQVHYTFVKGNLKLQMPPSYSLVIQESEKGSWHVPLALGTSNESSRPWLCITRKSADNNVATVSNGVATSGNGDLDQPQKLADNVRSLDSQVIDNNSTSITGKRKERSEPS* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1436 555 Gene3D Tetratricopeptide repeat domain 25 495 IPR011990 GO:0005515
Tpr7g1436 555 MobiDBLite consensus disorder prediction 529 543 - -
Tpr7g1436 555 Pfam Pentacotripeptide-repeat region of PRORP 17 226 IPR033443 -
Tpr7g1436 555 Pfam Protein-only RNase P 267 494 IPR031595 -
Tpr7g1436 555 MobiDBLite consensus disorder prediction 1 22 - -
Tpr7g1436 555 PANTHER UNCHARACTERIZED 9 501 - -
Tpr7g1436 555 MobiDBLite consensus disorder prediction 529 555 - -
Tpr7g1436 555 Gene3D - 284 460 - -
Tpr7g1436 555 PANTHER PROTEINACEOUS RNASE P 3 9 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1436 Tpr-Chr7 15724962 15731728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1436 88 200 Glycosyltransferase AT1G05670 23.894 9.76e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1436 7 15724962 15731728 Tpr7g1436 7 15724962 15731728 ECH