LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1401	ATGGGAATCGAATTTGCCATCAAAACTCTTTGCAGAAGCATCAAAGCAGACGAATTTGCACAAAAAAGAAGAAACTCATTGGTTTCCAAGCATGGTTCATGTTGGTTTCAGCTCAAGTTCACTGGTATGATGCAATGGGGCCAACGCCGCCATGTTCGGTTCCTTGGTCGTCATGAGGACAAAAAGCTTCAATTTTTACGTGAAAATCGTAAGGAAAAAGGTGTCATTTTTGAACGAGGGGATAGTAGGAAGAGGAAAAACAACGTTGAAGATGAAATGAAGGGTGTAAAGGTGGCTCCTTTTAGGGTATCGGATTCGGAGCCGAGGATGACTCGTCGATGTAATCAACAAGGTGTGAGTAGTAGCAGTGTTGCTAAAAAGTCTAAGAATGAAGTAGATGACACCAAGAAGCAGCAACTTGTGCTTTATGGGAAAAAGAAGGGGAAGATATTAATTGATAGATGGTGTGCTAAGAGGTATAAGTCGGCAGAGGAGAGTGTGTTGAAAGTTTTGAAGGAAAGAGAAGCTGTGTATGGAAACCCAATAATGAGGTCAGACTTGAGAAAAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCAGGAGGGGTTGAAAGATTCCGTCGGCGACATAATGCAGAAGGTTCAATGGAATATTGGTTAGAGAGTGCTGATCTTGTTGACATTAGAAAGGAATTGGGTGTCCAAGACACTTACTGGACTCCTCCCCCTGGATGGAAGCCTGGAGATGGCATTTCACCAGATCATGTTAATAGTAATGAACTCAGAATGATAAGGAATGAGATAATTAAGTTGAAAAGAGAGATGCAGGAACTTGCATCAAAAAAAGAAGAGGAAGCATTGGCCATTGTGGCTACTCCAACTTCTTGTTTGTCAAGTTTGAATTGTGAGGACTATGGTTCCCAGGTTTCTAAGCAGGATATTTATGTGGACTTGGTTCATAGAAAGGCTAAAATTGAAGAACAACTAAAGGAAATTTCTCTGGCTATGAGTGTCATAGAGGATCAACTGGGAATGCTGAAACCAGCAGTGATAGAAGAACCAATAATGTCAGAATCATCAACACCACCAGCATTATTGCTTGGACCAGCAACATTGGCACAAAACATTGGAGAAGAGACAAGTGAGGATGTGAAAGGTACTAATGACAAAGAAACAAAATCAGCAGACAAACAAATGGTACTAAGCAGCAAATCAGAGCTCAGGGCAGCAAAAATAGAAAGATTGAAAAGTGGTTTCAAAATTTGCAAACCAAAAGGGACCTTTATGTGGCCAAATATGAGTGTATCTCCAAATCTATTGACCAACCTTGATGAACACACTATGGTCCCAACACCAACCTCAGCTTTCAAGCTTGTCACAAAATCTCATACTCAGAACTTGTCCTTACTTAATCCTTCTTCTCCTATTATTAAGCCACTCGCTGCGAGGCGCACTGTGAGCACTGCTACTTTGACATATGTCACTGGACCCTTTTCCCCTCATCTTTCTCCTCCACTAGAAACTTCAAGGTCCAAAATCACTACCACCATCACCAAGAGCAGTTCATCCATTAACCTTAATGAGAGTCCTCTGGGCCGAGAGTAA	1647	0.4165	MGIEFAIKTLCRSIKADEFAQKRRNSLVSKHGSCWFQLKFTGMMQWGQRRHVRFLGRHEDKKLQFLRENRKEKGVIFERGDSRKRKNNVEDEMKGVKVAPFRVSDSEPRMTRRCNQQGVSSSSVAKKSKNEVDDTKKQQLVLYGKKKGKILIDRWCAKRYKSAEESVLKVLKEREAVYGNPIMRSDLRKEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESADLVDIRKELGVQDTYWTPPPGWKPGDGISPDHVNSNELRMIRNEIIKLKREMQELASKKEEEALAIVATPTSCLSSLNCEDYGSQVSKQDIYVDLVHRKAKIEEQLKEISLAMSVIEDQLGMLKPAVIEEPIMSESSTPPALLLGPATLAQNIGEETSEDVKGTNDKETKSADKQMVLSSKSELRAAKIERLKSGFKICKPKGTFMWPNMSVSPNLLTNLDEHTMVPTPTSAFKLVTKSHTQNLSLLNPSSPIIKPLAARRTVSTATLTYVTGPFSPHLSPPLETSRSKITTTITKSSSSINLNESPLGRE*	549

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g1401	548	MobiDBLite	consensus disorder prediction	396	411	-	-
	Tpr7g1401	548	Coils	Coil	275	302	-	-
	Tpr7g1401	548	MobiDBLite	consensus disorder prediction	110	126	-	-
	Tpr7g1401	548	PANTHER	PROTEIN DYAD	21	530	-	-
	Tpr7g1401	548	PANTHER	PROTEIN DYAD	21	530	IPR044221	GO:0007131\|GO:0051177\|GO:0051321
	Tpr7g1401	548	MobiDBLite	consensus disorder prediction	106	131	-	-
	Tpr7g1401	548	Coils	Coil	336	356	-	-
	Tpr7g1401	548	MobiDBLite	consensus disorder prediction	391	413	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1401	Tpr-Chr7	15056151	15059347	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1401	154	235	PHD Transcription Factor Family	AT5G22260	39.024	3.54e-06	48.1