Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1396 ATGGATCTCATTATTTCCCACACTCCAAACCCATTTCTTCTCTCCTCATCATCACTAACTCCAACTCTTCAAAATCCTAACTTTTTCACGTTAACCCCATCCTTCAGTAACCGCAGAAAGCTCAAACTTCGAGCTTCATCTACAGCAGACCCAAATGGCGCTGATGGGTCTTCTTGGTCACAGTCACTGGAACGCGCTTCGAAGCGGTTTTTGGTGAAATTCGGAGATATGGTGAAGAAAGAAATAGGTGTTGATTTGGGAGATGGTGTTGTGAAGGCAGGTGAGTTTGTGGATGGTGTGAAGAAGAATGTTGGGAGTGAGTTTCAAACTCTTTCACTGTCCGAGTTTGTTGAATGGAATCGGTTTGAACATTGGAAGAATCTCAAGAACTGGGATCCTAGGCGAATCGGTGCTTTAGTTCTGTATATATTTGTTGTAGCATTTGCTTGTAGAGGATTTTATGTAGCAATTCAAGCAACTTTCATAAACCGCCAGAGGAAAGAGTTGACTGAAGCCTACATGGAAGCGTTGATTCCTGAGCCATCCCCAACAAACATCAGAAGATTTAAGAAGGGTTTGTGGAGGAAGACAATGCCAAAAGGCCTGAAAATGAAAAGGTTTATTGAAAGACCTGATGGAACACTTGTTCATGATACCAATTATGTTGGAGAGGATGCATGGGAGGATGATCAGGATACTTCTGAGGAACATGTTAAACAATTTATAGAGGACGATGAACGGTTAAACAGTGAAGAGAAGAAAACCAAAGATCTGGCCATTTCAGGCGAAGTTCAAACTGAGGGCACATGGCGTGAGAGACTTCATAAATGGAGGGAAATCCTTGGAAAAGAGCGTCTCGTTGATCAATTAAATTCCTCAAATGCCAAATATGCAGTTGAGTTTGACATGAAAGAGGTTGAAAACAGTCTTCGCAAGGATGTGGCAGAAAAAGCAACAGCCACTCAGGGAACAAGAGGTCTGTGGATAGCTAAGAGATGGTGGCGCTATCGTCCTAAACTTCCTTACAATTACTTTCTTAACAAACTTGATAGTTCCGAGGTAGAAGCTGTTGTCTTTACAGAAGATATAAAGAGATTATATGTGATAATGAAAGAAGGTTTCCCATTGGAATATGTTGTTGATATTCCTCTTGATCCTTATCTATTTGAGATTATTACAAGTTCTGGAGTGGAAGTAGAGCTTCTTCAGAAGAAACAGATCCATTATTTTTTGAAGGTTGCATTTGCATTTTTACCTGGATTACTAATTCTGTGGCTTATAAGGCAGTCTCTGTCTCTTCTGCACATCACTTCCAGTCGTTTTCTTTACAAGAAGTATAAGCAACTCTTTGATATGGTTGATGCAGAAAATTTCATTCTGCCAGTTGGAGATGTTGGTGAAACAAAATCCATGGCAAAGGAAGTTGTGTTGGGAGGTGATGTTTGGGATCTGCTTGATGAGCTGATGATCTATATGAAAAATCCTATGCAGTTCTTTGAAAGGGATGTGAAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTTGCAAGGACGCTTGCAAACCAAAGTGGATTGCCTTTTGTTTTTGCTTCTGGTGCTGAGTTCACAGATAGTGAACAGAGTGGAGCAGCTAGGATTAATGAGATGTTTTCCCTTGCTAGGAGAAATGCACCTTGTTTTATATTTGTGGATGAAATAGATGCCATTGCTGGAAGACATACTCGGAAGGATCCACGTAGAAGGGCAACTTTTGAGGCTCTTATTTCACAGCTTGATGGAGAGAAGGAAAAAACTGGTGTTGACCGTGTATCCCTCAGACAAGCGGTCATATTTATCTGTGCCACAAATAGACCCGATGAATTAGATGTTGAATTTGTTCGATCTGGACGAATTAATCGTCGTCTATACATTGGTTTGCCTGATGCAGAACAAAGAATCAAAATTTTTGGTGTGCATAGTTCTGGAAAGCAACTTGCAGAGGATGTGAATTTCTCGCAGCTTGTCTTCCGTACTGTTGGATTCTCTGGAGCAGATGTAAGAAACCTTGTCAATGAAGCAGCAATTATGTCGGTGAGAAACGGGCATTCCAAAATTTTCCAGCAAGATATTGTTGATGTTCTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTATCACTGAGGATGAGCAAAAGAAGTCTGAAGAAAGAGTGTCTTTCGAAAAAAAGAGACTGCTTGCTGTACATGAAGCCGGTCATATTGTGCTTGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCGCAGCTCCTGCCCGGTGGTAAGGAAACTTCAATATCTGTTTTCTACCCTCGAGAAGATATGGTAGACCAAGGTTATACAAATTTTGGTTACTTGAAGATGCAAATGGTAGTTGCTCATGGTGGTCGATGTGCTGAACATGTTATATTTGGTGATGATATTACTGATGGAGGAAGGGATGACCTAGAAAAGATAACAAAGATTGCCAGGGAGATGGTAATCAGCCCTCAAAATAGAAGGTTGGGGTTAATAGCTTTAACAAACAGGGTTGGCTTAACTGATCGACCAGACTCTTCAGATGGCGATTTAATAAGATATAGATGGGATGATCCTCAAGTAATTCCTACAAAGATGTCGGTAGAGTTATCCGAGCTCTTCACACGGGAGTTGACAAGGTTCATTGAAGAAACCGAAGAACTTGCTATGAATGCTTTGAGGGATAATAAGCACATCCTGGACTTGGTTGCAAGGGAACTATTGGAGAAGTCACGAATAACTGGATTGGAGGTTGAAGAAAAATTGAAAACAATGTCTCCGGTAATGTTTGAGGACTTTGTAAAGCCATTCCAAATAAACATCGAAGAGGATGGACCATTGCTGCATAATGATCGTGTACGGTATCGGGAACCTGACTTATACCCTGCTCCTCTCCACAGAGGTTAA 2967 0.4119 MDLIISHTPNPFLLSSSSLTPTLQNPNFFTLTPSFSNRRKLKLRASSTADPNGADGSSWSQSLERASKRFLVKFGDMVKKEIGVDLGDGVVKAGEFVDGVKKNVGSEFQTLSLSEFVEWNRFEHWKNLKNWDPRRIGALVLYIFVVAFACRGFYVAIQATFINRQRKELTEAYMEALIPEPSPTNIRRFKKGLWRKTMPKGLKMKRFIERPDGTLVHDTNYVGEDAWEDDQDTSEEHVKQFIEDDERLNSEEKKTKDLAISGEVQTEGTWRERLHKWREILGKERLVDQLNSSNAKYAVEFDMKEVENSLRKDVAEKATATQGTRGLWIAKRWWRYRPKLPYNYFLNKLDSSEVEAVVFTEDIKRLYVIMKEGFPLEYVVDIPLDPYLFEIITSSGVEVELLQKKQIHYFLKVAFAFLPGLLILWLIRQSLSLLHITSSRFLYKKYKQLFDMVDAENFILPVGDVGETKSMAKEVVLGGDVWDLLDELMIYMKNPMQFFERDVKFVRGVLLSGPPGTGKTLFARTLANQSGLPFVFASGAEFTDSEQSGAARINEMFSLARRNAPCFIFVDEIDAIAGRHTRKDPRRRATFEALISQLDGEKEKTGVDRVSLRQAVIFICATNRPDELDVEFVRSGRINRRLYIGLPDAEQRIKIFGVHSSGKQLAEDVNFSQLVFRTVGFSGADVRNLVNEAAIMSVRNGHSKIFQQDIVDVLDKQLLEGMGVLITEDEQKKSEERVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETSISVFYPREDMVDQGYTNFGYLKMQMVVAHGGRCAEHVIFGDDITDGGRDDLEKITKIAREMVISPQNRRLGLIALTNRVGLTDRPDSSDGDLIRYRWDDPQVIPTKMSVELSELFTRELTRFIEETEELAMNALRDNKHILDLVARELLEKSRITGLEVEEKLKTMSPVMFEDFVKPFQINIEEDGPLLHNDRVRYREPDLYPAPLHRG* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1396 988 Pfam AAA+ lid domain 668 708 IPR041569 -
Tpr7g1396 988 SMART AAA_5 505 648 IPR003593 -
Tpr7g1396 988 PANTHER ATP-DEPENDENT PROTEASE 33 987 - -
Tpr7g1396 988 Pfam Peptidase family M41 738 939 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Tpr7g1396 988 Gene3D - 466 647 IPR027417 -
Tpr7g1396 988 CDD AAA 507 646 - -
Tpr7g1396 988 Gene3D - 648 722 - -
Tpr7g1396 988 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 33 987 - -
Tpr7g1396 988 Gene3D Peptidase M41 731 947 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Tpr7g1396 988 Pfam ATPase family associated with various cellular activities (AAA) 509 645 IPR003959 GO:0005524|GO:0016887
Tpr7g1396 988 SUPERFAMILY FtsH protease domain-like 740 952 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Tpr7g1396 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 716 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1396 Tpr-Chr7 14991820 15007147 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1396 7 14991820 15007147 Tpr7g1396 7 14991820 15007147 ECH