Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1383 ATGACTGTGGAGACTCACCGTCTCAACCTTTTTCCTTCTCAACTCCTACCCAACAACAGAGACATGAACATTCATCCCACCGACACAAGCTTCATGAACATGTACAATTACTCCTCACTACTTCCACTTTCCGGCACCACCACCACCGTGTCGGAGAATCTCATCCCTTCGCAACCACCGCCGTACAATCCTTTCATAAGTGATAACCTTCTTCAAAAAATCTCCGCCATGAAATCCGACAGCATCCTCACTTGCAACAACAATAACAACAACGTTGTCTCGTTCCCACGAAAACGTTCTAGAGACTCAATCAATAACTACCCTTTCGTTTCTTATAAGAATAGCGGAAATTTCTCCTTCCTCGGTGAAGATTTTTCTCAAAACATCAACAACCAAAACACCTACATCGACAGCATCATTTCTCAACATACGGAGAAAGTGAGAGTTGAATTGGAAGAAAAGAGAAAACGACAAACTCGGTTGATAATGGAAGCAATGATGAAAAGATTAAAAGCTAAAGAAGAAGAAATAAAAAAGATTGAAATAATGAACATGATGCTTGAAGAGAGAGCAAAATCACTATGCATGGAGAATCAAATATGGAGAGAAATAGCACAAAGCAAAGAAGCAACAGCCAATGCACTCCGGAACAATCTTGAACAAGTCCTTGAACAGATGACAAACGGTGGCGGCGAAGATGCCCCCGTCGTGCCGGAAGAGGATGCTGAGTCATGCTGCGGAAGTAATGATGAAAATTTCAGGTGGCGCACTGTAGCAGATTGTGCGCAGGATAAGGATGAAGGTAGAGTGATGATGATGAATGGTGGTTGCAGTGAAAAGAAGAGATTGTGCAGGAATTGTGGTAAAGGAGAATCGTGCGTACTGATTTTACCTTGCAGACATCTCTGTCTATGTACTATGTGTGGGGCTACGGTTTATACTTGTCCTATCTGTAAATCCTTCAAAAACGCTAGTTATCAGGTTAACTTAAGTTAA 996 0.4197 MTVETHRLNLFPSQLLPNNRDMNIHPTDTSFMNMYNYSSLLPLSGTTTTVSENLIPSQPPPYNPFISDNLLQKISAMKSDSILTCNNNNNNVVSFPRKRSRDSINNYPFVSYKNSGNFSFLGEDFSQNINNQNTYIDSIISQHTEKVRVELEEKRKRQTRLIMEAMMKRLKAKEEEIKKIEIMNMMLEERAKSLCMENQIWREIAQSKEATANALRNNLEQVLEQMTNGGGEDAPVVPEEDAESCCGSNDENFRWRTVADCAQDKDEGRVMMMNGGCSEKKRLCRNCGKGESCVLILPCRHLCLCTMCGATVYTCPICKSFKNASYQVNLS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1383 331 ProSiteProfiles Zinc finger RING-type profile. 284 319 IPR001841 -
Tpr7g1383 331 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 330 - -
Tpr7g1383 331 Coils Coil 156 190 - -
Tpr7g1383 331 PIRSF SBP1_RNase_bind 1 331 IPR017066 -
Tpr7g1383 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 329 IPR013083 -
Tpr7g1383 331 Coils Coil 205 225 - -
Tpr7g1383 331 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 330 IPR017066 -
Tpr7g1383 331 Pfam Zinc finger, C3HC4 type (RING finger) 281 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1383 Tpr-Chr7 14780174 14781864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1383 283 320 Miscellaneous Gene Families AT4G39050 39.474 2.93e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1383 7 14780174 14781864 Tpr7g1383 7 14780174 14781864 ECH
Tpr7g3202 7 39762338 39764162 Tpr7g1383 7 14780174 14781864 PCT