Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1039 ATGCACAGAAAAATCTTGTTCTTGTTCCTCTCATCATCACTACTCTTCACAACAACAACCTCAAAATCAACAATCGAACCATGCACAAACTCAGACACATGTAATGCATTACTCGGTTACACACTCTACACAAACCTCAAAGTCTCCGAAGTTTCTTCCCTTTTTCAAATCGATCCAATCTCTCTTCTAACCGCCAATGCAATTGACATATCTTACCCAGACGTAGAACATCACATCCTTCCTTCAAAACTTTACCTCAAAATCCCAATCTCATGTTCTTGTGTTGATGGAATTCGTAAATCTGTTTCAACAAACTATAAGATTCGTCCTTCTGATACTCTTTCATCTATTGCTGATTCTGTTTATGGTGGTTTAGTTTCTTCTGATCAACTTAAAGAAGCTAATTCTATAACTGATGTTAATGTTCTTGATGTTGGACAGAATCTTGTTGTTCCTCTTCCTTGTACTTGTTTCAATGGTTCTGATAATGCTTTGCCTGCTATTTATTTGTCTTATGTTGTTCAACCGTTGGATAGTTTAGGTTCTATTGCTGCTAGGTATTTTACTACTCTTACTGATTTGATGAATGTTAATGCTTTGGGAAGTACTTCTATCTCTAATGGTGATATTCTTGCTATTCCGATTCCGGCTTGTGCTTCAAATTTCCCAAAATATTCTTCTGATTTTGGCTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCATTGTGTGCAATGTAGCTGTGGACCCCGAAACTTAAATTTGTACTGTATGCCGGCTTCACTAGCTGTTTCTTGCTCCAGCATGCAATGTAAAAACAGCAACCTTATGCTCGGCAATGTTACCATTCAACAAACTAGTGGTGGTTGCAATGTGACTTCTTGCATTTATGATGGTATTGCTAATGGCACCATAGCAACAACGTTGACTCCATCCCTTCAGCCTCGATGTCCAGGGCAGCAGGAATTCCCCCCTCTTATCGCCCCACCTACATCTGTTGAGAGAGATTCAGTATTTGCACCGGCACCATCACCATCATCGTTTGACGGAATCGATGGAAGATCGCCCAAATCATCAATCATGCCTTCAACAGGATTTACTCCTGCTAATGGCCCTATTAGTGGGATTTCTTCTGGCGCTTCTGCTGCATCCTCCTTGGTGAAACCATTACCCACGTTGACGCTTCCACTTGTGTTGTTACTTGTCAAGTTGATGATCCCTGCGGCATTGTAA 1239 0.4084 MHRKILFLFLSSSLLFTTTTSKSTIEPCTNSDTCNALLGYTLYTNLKVSEVSSLFQIDPISLLTANAIDISYPDVEHHILPSKLYLKIPISCSCVDGIRKSVSTNYKIRPSDTLSSIADSVYGGLVSSDQLKEANSITDVNVLDVGQNLVVPLPCTCFNGSDNALPAIYLSYVVQPLDSLGSIAARYFTTLTDLMNVNALGSTSISNGDILAIPIPACASNFPKYSSDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTIQQTSGGCNVTSCIYDGIANGTIATTLTPSLQPRCPGQQEFPPLIAPPTSVERDSVFAPAPSPSSFDGIDGRSPKSSIMPSTGFTPANGPISGISSGASAASSLVKPLPTLTLPLVLLLVKLMIPAAL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1039 412 Pfam LysM domain 172 214 IPR018392 -
Tpr7g1039 412 Pfam LysM domain 106 152 IPR018392 -
Tpr7g1039 412 SUPERFAMILY LysM domain 105 153 IPR036779 -
Tpr7g1039 412 Gene3D LysM domain 161 222 IPR036779 -
Tpr7g1039 412 ProSiteProfiles LysM domain profile. 170 213 IPR018392 -
Tpr7g1039 412 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 5 351 - -
Tpr7g1039 412 SUPERFAMILY LysM domain 170 215 IPR036779 -
Tpr7g1039 412 Gene3D LysM domain 100 160 IPR036779 -
Tpr7g1039 412 ProSiteProfiles LysM domain profile. 104 151 IPR018392 -
Tpr7g1039 412 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 5 351 - -
Tpr7g1039 412 CDD LysM 171 213 IPR018392 -
Tpr7g1039 412 CDD LysM 106 151 IPR018392 -
Tpr7g1039 412 SMART LysM_2 105 152 IPR018392 -
Tpr7g1039 412 SMART LysM_2 171 214 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1039 8 387 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.130 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1039 - - gmx:100808966 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1039 7 9956216 9959629 Tpr7g1039 7 9956216 9959629 ECH