Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0864 ATGGCTATGGAAGCGCTTAACTCTCCCACCACCGCTACTCCTTTCACTCCTTTCGAGGAACCAAATCACAGTTACATCGATGCTGCACCTTGGACTAAAGGTAAACGTTCTAAACGTTCTCGTATGGATCAATCTTCTTGTACTGAAGAAGAGTATCTCGCTCTCTGTCTCATCATGCTCGCTCGCAGCGGAAACAACAACAACAACAACAAGATTATTACTCTTCCCACCGCCGTCAAACCTGCTCTATCTGACACCGAATCAGCACCCGCTAAACTCAGTCACAAATGCTCTGTTTGCAACAAAGCTTTTTCATCTTATCAAGCACTTGGTGGACACAAAGCCAGTCATCGGAAAAGTGCTGTTATGTCAACTGGTGAAGATCATCAGACTACAACAACCTCATCCGCTGTGACTACAAGCTCTGCTGCATCCAACGGTAAGATCAAGTCTCATGAATGTTCCATTTGTCATAAATCCTTTCCTACTGGACAAGCTTTGGGAGGACACAAGCGTTGTCACTATGAAGGTGGTGCCGGTGCCGGTGGTGGAAACAGCACCGTAACTGCTTCTGAAGTTGGATCTTCTCACAGTCAACACCGTGATTTTGATCTTAACCTCCCGGCTTTTCCGGACTTTTCAAAGAAGTTTTTCGTGGATGATGAGGTTTCCAGTCCTCATCCTGCAGCTAAGAAGCCATGTCTTTTCAAGATTGAAATTCCTCAATATTGA 732 0.4536 MAMEALNSPTTATPFTPFEEPNHSYIDAAPWTKGKRSKRSRMDQSSCTEEEYLALCLIMLARSGNNNNNNKIITLPTAVKPALSDTESAPAKLSHKCSVCNKAFSSYQALGGHKASHRKSAVMSTGEDHQTTTTSSAVTTSSAASNGKIKSHECSICHKSFPTGQALGGHKRCHYEGGAGAGGGNSTVTASEVGSSHSQHRDFDLNLPAFPDFSKKFFVDDEVSSPHPAAKKPCLFKIEIPQY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0864 243 MobiDBLite consensus disorder prediction 125 144 - -
Tpr7g0864 243 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 174 IPR013087 -
Tpr7g0864 243 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 234 IPR044653 GO:0003700
Tpr7g0864 243 Gene3D Classic Zinc Finger 93 174 - -
Tpr7g0864 243 MobiDBLite consensus disorder prediction 1 18 - -
Tpr7g0864 243 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Tpr7g0864 243 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
Tpr7g0864 243 MobiDBLite consensus disorder prediction 118 144 - -
Tpr7g0864 243 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 117 IPR013087 -
Tpr7g0864 243 SUPERFAMILY beta-beta-alpha zinc fingers 95 174 IPR036236 -
Tpr7g0864 243 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g0864 243 Pfam C2H2-type zinc finger 152 175 - -
Tpr7g0864 243 Pfam C2H2-type zinc finger 95 119 - -
Tpr7g0864 243 PANTHER ZINC FINGER PROTEIN ZAT10 1 234 - -
Tpr7g0864 243 SMART c2h2final6 95 117 IPR013087 -
Tpr7g0864 243 SMART c2h2final6 152 174 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0864 Tpr-Chr7 7655716 7656797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0864 1 240 C2H2 Transcription Factor Family AT1G27730 46.559 2.58e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g0864 zf-C2H2_6 2.8e-12 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0864 7 7655716 7656797 Tpr1g0482 1 4066256 4067559 ECH
Tpr7g0864 7 7655716 7656797 Tpr7g0864 7 7655716 7656797 ECH
Tpr1g3636 1 40507539 40508645 Tpr7g0864 7 7655716 7656797 PCT