Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0857 ATGGAAGGAACTTTCAATTTCAACGATAATTCAACTTCCGCTTTCAGCGACTGCAACAGTGACAGATCTGGCGAATTCATCACAACTTCTACACAAAACCGACGCCTTCTGATTTCATGTGTTTCTGATAATAACTCCGACGAACTCATTCGCCGGTTAGTTCTCGATCTTCAATCATGTTCGATTGATCAACAAAAACAAGCTACAATGGAAATCAGATTACTCGCTAAAAACAAGTCAGATAACCGTCTCAGAATCGCGAAAGCCGGCGCTATTAAACCGTTAGTTTCGCTTTTATCTTCGCCGGTGGTGGACCTTCAGCTGCAAGAATACGTCGTCACTGCAATTTTGAATCTCTCGTTATGTGACGAGAATAAAGATATTATTGCTTCTTCTGGAGTGATTAAGCCTATGGTGAGAGCATTGAAGATAGGAACTCCAACGGCGAAGGAGAATGCGGCATGTGCTCTGCTTCGTCTCTCGCAGACAGAGGAAAACAAAGCGGCAATTGGAAGATATGGAGGTATTCCGCCATTGGTGAACCTTCTAGAAAATGGAGGTATCCGCGGGAAGAAAGACGCGTCGACGGCGTTGTATACGCTTTGTTCAGTGAAGGAGAATAAAATTAGAGCGGTGAAAGCTGGGATAATGAAGCCGTTAGTGGAATTGATGGCGGATTTGGATTCTAACATGGTGGATAAATCGGCGTATGTGATGAGCATGTTGGTGACGGTTATGGAAGCGAGAACGGCGTTGGTGGAGGAAGGAGGGATTCCGGTGTTGGTTGAAATTGTGGAGATAGGAACGCAGAGACAGAAGGAAATAGCGGTGGTGATTTTGTTGCAGATTTGTGAAGAGAATGTGAGTTATCGGATAATGGTGTGTCGTGAAGGAGCTATTCCTCCGTTGGTTTGTCTTTCTCAGTCCGGTACCGATCGCGCCAAACGAAAGGTGGAGACACTAATAGAACTTCTACGGCAACCAAGATCAAGCAACCCCACTGCACGTGCTTCATAA 1017 0.4523 MEGTFNFNDNSTSAFSDCNSDRSGEFITTSTQNRRLLISCVSDNNSDELIRRLVLDLQSCSIDQQKQATMEIRLLAKNKSDNRLRIAKAGAIKPLVSLLSSPVVDLQLQEYVVTAILNLSLCDENKDIIASSGVIKPMVRALKIGTPTAKENAACALLRLSQTEENKAAIGRYGGIPPLVNLLENGGIRGKKDASTALYTLCSVKENKIRAVKAGIMKPLVELMADLDSNMVDKSAYVMSMLVTVMEARTALVEEGGIPVLVEIVEIGTQRQKEIAVVILLQICEENVSYRIMVCREGAIPPLVCLSQSGTDRAKRKVETLIELLRQPRSSNPTARAS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0857 338 Gene3D - 27 189 IPR011989 -
Tpr7g0857 338 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 90 134 IPR000225 GO:0005515
Tpr7g0857 338 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 9 333 - -
Tpr7g0857 338 SMART arm_5 122 162 IPR000225 GO:0005515
Tpr7g0857 338 SMART arm_5 204 244 IPR000225 GO:0005515
Tpr7g0857 338 SMART arm_5 287 327 IPR000225 GO:0005515
Tpr7g0857 338 SMART arm_5 79 121 IPR000225 GO:0005515
Tpr7g0857 338 SMART arm_5 245 285 IPR000225 GO:0005515
Tpr7g0857 338 SMART arm_5 163 203 IPR000225 GO:0005515
Tpr7g0857 338 PANTHER U BOX DOMAIN-CONTAINING 9 333 - -
Tpr7g0857 338 Gene3D - 190 337 IPR011989 -
Tpr7g0857 338 SUPERFAMILY ARM repeat 46 328 IPR016024 -
Tpr7g0857 338 Pfam Armadillo/beta-catenin-like repeat 123 161 IPR000225 GO:0005515
Tpr7g0857 338 Pfam Armadillo/beta-catenin-like repeat 164 203 IPR000225 GO:0005515
Tpr7g0857 338 Pfam Armadillo/beta-catenin-like repeat 80 120 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0857 Tpr-Chr7 7611781 7615858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0857 50 332 U-box Gene Family AT2G23140 49.470 1.25e-81 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3628 1 40446440 40449651 Tpr7g0857 7 7611781 7615858 PCT