Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0328 ATGGCGAAATCAAGCGCCGATGATGCCGAACTCCGGCGAGCTTGCGAGGCTGCAATTGAAGGCACCAAGCAGAAGATCGTCATTTCCATCCGAACCGTCAAGACTCATGGCACCTGGGGAAAAGCGGCCAAGCTTGGTGGTGGTCGTCAAATGGCTAAACCTAGGGTTCTCGCTATCTCCACAAAAGCGAAAACTCAACGGACAAAAGCTTTTCTTCGAGTTTTAAAGTATTCGAATGGAGGAGTTCTTGAGCCTGCTAAGATATACAAGCTGAAGCATCTCTCAAAAGTAGAAGTTGTAACAACTGATCCCAGTGGATGTACATTTACATTGGGATTTGACAACCTTAGAAATCACAGTGTGGCTCCTCCACAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTGCTGTCTATCTTGAATATCTGCAAAGATGCCCTGGGTCGCCTTCCGAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTTCCACTCAAAATAACCAAGCAGATGGTGCTTCTGTTGTATCTGATGTCAGTGAAGCAGAATTGAAAGTCAATGTTGAAAAGGACCTTGTCTCACAAGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAAATTATATCACGGGTATTAGTCAAGCAGAGGCTTTTTCTGAAAGGTTGAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCTATTTTAGAAAGTGAACCTTTGATAGATGAGGTGCTAAAAGGGCTTGAAGCTGCTTCAAATTGCGTGGAAGACATGGATGAATGGTTAGGCATGTTCAATGTGAAACTCCGACACATGAGGGAGGATATTGAATCAATTGAAATCCGCAATAACAAATTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAAGAGCTTGATAAACTTCTTGAGCAATTGAATATCCCCCCTGAGTATTCAGCATTTTTGACAGGAGATTCATTTGATGAAGCACAAATGCTTCAAAATGAAGAAGCGTGTGAGTGGTTGATTGGTGCCTTGCGTGGTTTTCAAGCTTCTACCATCGATCCTGCTTATGTAAAAATGAGAGCTTTTAAAGAGAAGCGAGGAGAACTTCAAATAATAAAATCTATTTTTGTCACGAAAGTTTCTGAATTTTTGAGGAATTACTTTGCTACTTTTGTTGATTTCTTGATGAATGATAAAAGTTACTTTTCTCAGGTATTTTCTGCATACATTATTTATGGAATTATAAACTTAAAATCTTTAATTTTCACTTTGTCTGCTTGTTCTAAACAGCGAGGACAGTTGAAAAGGCCAGATCATTCTGACCTGCGATACAAGTGCAGGACATATGCACGCCTTTTGCAACATTTAAAGGTTCTTGACAAGAATTGCTTGGGCCCATTGAAAAAGGCTTATTGTTGTTCTCTAAACTTGCTTCTTCGCAGGGAGGTCCGTGAGTTTGCTAATGAACTTCGTGCAGAATCTAAAACTTCCCCAGGTCCTGGTCAGAATGTAAATTCTGCTGACTCTTCGGCAGTTTCTGATGCATATGCAAAGATGCTCACCGTTTTTATCCCACTTATGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTCGAAGCTCCTCCACTTGATGGTAATAAATCTGGACACAATGATGATGCTAACGATGATGATGATTTGGGAATTGCAGACATTGATGAGAATGATAGTAAATCCAATATGAGTCCTGCGGAGCTTGCAGCTTTAAACGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCTATGCTGTTGTGGATTGGGCATGTAAGATTGATCCTTTATGCTGCATATCAATGCATGGAATAACAGAACGCTATCTCTCTGGTCAAAAAGCTGATGCATCAAGATTTGTCAGCCTTATGCTCAGTGAACTTGAGTGTCGGATATCTATGCTATTCATTCGTTATGTTGATGATTCTTGTCATAATATTGAAAAGTGTGAGCGCAATGCTAAACAAAGTGTCCTGCCCTACATTCCCAGATTTGCAACCCTTGCAACAAAGATGGAGCAATACATCGCTGGACAGTCTAGGGATTTGGTTGACCAAGCATACATGAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAGACTTGCACAAACAGAGCCAAAGTATGCAGATATTTTCCTTATAGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTAGCCAATGTGGTGCCTACTTTGGCCAAGTTTTATCATCAAGCTAGTGAAGCGTATGAGCAATCATGCTCACGCCATATTAGCATGATTATCTATTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAGGACTTGATTTTAAATAATGTTTCACCCGAAGAGATTCCTTTCCAGCTTGGGCTGTCAAAAGTGGATTTTCGAAAGATGCTAAAATCCAGTTTGTCAGGGATGGACAGGTCCATTGGTGCAATGTATAAGAAATTGCAAAAGAATTTGACTTCAGAGGAACTGTTACCTTCCTTGTGGGATAAATGCAAGAAGGATTTTGTTGATAAGTATGACAGTTTTGTCCAACTTGTTGCCAAGATTTACCCTGCTGAGTCAGTCCCTACTACAGCAGAATTGAGAGAGCTTTTAGCCAAGATGTAA 2697 0.406 MAKSSADDAELRRACEAAIEGTKQKIVISIRTVKTHGTWGKAAKLGGGRQMAKPRVLAISTKAKTQRTKAFLRVLKYSNGGVLEPAKIYKLKHLSKVEVVTTDPSGCTFTLGFDNLRNHSVAPPQWTMRNIDDRNRLLLSILNICKDALGRLPKVVGIDVVEMALWAKENTPAVSTQNNQADGASVVSDVSEAELKVNVEKDLVSQAEEEDMEALLGNYITGISQAEAFSERLKRELQALEAANVHAILESEPLIDEVLKGLEAASNCVEDMDEWLGMFNVKLRHMREDIESIEIRNNKLEMQSVNNKSLIEELDKLLEQLNIPPEYSAFLTGDSFDEAQMLQNEEACEWLIGALRGFQASTIDPAYVKMRAFKEKRGELQIIKSIFVTKVSEFLRNYFATFVDFLMNDKSYFSQVFSAYIIYGIINLKSLIFTLSACSKQRGQLKRPDHSDLRYKCRTYARLLQHLKVLDKNCLGPLKKAYCCSLNLLLRREVREFANELRAESKTSPGPGQNVNSADSSAVSDAYAKMLTVFIPLMVDESSFFAHFMCFEAPPLDGNKSGHNDDANDDDDLGIADIDENDSKSNMSPAELAALNESLQDLLDGIQEDFYAVVDWACKIDPLCCISMHGITERYLSGQKADASRFVSLMLSELECRISMLFIRYVDDSCHNIEKCERNAKQSVLPYIPRFATLATKMEQYIAGQSRDLVDQAYMKFVSIMFVTLERLAQTEPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQSCSRHISMIIYYQFERLFQFARRIEDLILNNVSPEEIPFQLGLSKVDFRKMLKSSLSGMDRSIGAMYKKLQKNLTSEELLPSLWDKCKKDFVDKYDSFVQLVAKIYPAESVPTTAELRELLAKM* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0328 898 Coils Coil 190 210 - -
Tpr7g0328 898 PANTHER SEC3/SYNTAXIN-RELATED 1 415 - -
Tpr7g0328 898 PANTHER SEC3/SYNTAXIN-RELATED 440 898 - -
Tpr7g0328 898 Coils Coil 223 250 - -
Tpr7g0328 898 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 51 146 IPR028258 -
Tpr7g0328 898 Coils Coil 283 320 - -
Tpr7g0328 898 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 415 - -
Tpr7g0328 898 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 440 898 - -
Tpr7g0328 898 Pfam Exocyst complex component Sec3 226 521 IPR019160 GO:0000145|GO:0006887
Tpr7g0328 898 Pfam Exocyst complex component Sec3 585 881 IPR019160 GO:0000145|GO:0006887
Tpr7g0328 898 SMART Sec3_PIP2_bind_2 50 148 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0328 Tpr-Chr7 2651836 2671216 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0328 7 2651836 2671216 Tpr7g0328 7 2651836 2671216 ECH
Tpr1g3731 1 41424463 41443784 Tpr7g0328 7 2651836 2671216 PCT