Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0306 ATGGCTTCAAGCTCGAATTGGACAGCAAAGCAGAACAAAAGATTTGAGAATGCATTGGCAATGTTGGAGAAGGATACTCCTGATCGTTGGCAGAAGCTAGCTAGAGCTGTGGGAGGGAAAACTATTGAAGAAGTGAAAAGACATTATGAGATGCTTGTTGAAGATGTGAAGCAGATTGAAGAAGGACATGTTCCCCTCCCTAATTACACAAATAATCTTGGTTACACTTACATAATGGATCAAGATAAAAGGATGAAGGCTCTAAGTCTCCATTGA 276 0.4022 MASSSNWTAKQNKRFENALAMLEKDTPDRWQKLARAVGGKTIEEVKRHYEMLVEDVKQIEEGHVPLPNYTNNLGYTYIMDQDKRMKALSLH* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0306 91 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Tpr7g0306 91 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Tpr7g0306 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Tpr7g0306 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 91 - -
Tpr7g0306 91 CDD SANT 6 53 IPR001005 -
Tpr7g0306 91 Coils Coil 42 62 - -
Tpr7g0306 91 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Tpr7g0306 91 Gene3D - 1 66 - -
Tpr7g0306 91 SMART sant 3 55 IPR001005 -
Tpr7g0306 91 SUPERFAMILY Homeodomain-like 6 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0306 Tpr-Chr7 2485901 2486822 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr7g0306 Myb_DNA-binding 4.6e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0306 7 2485901 2486822 Tpr7g0306 7 2485901 2486822 ECH
Tpr1g3774 1 41838141 41839315 Tpr7g0306 7 2485901 2486822 PCT