Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0277 ATGTCAAATTCCATGACTCATCAAAATCAATTTGAGAACCAAGAGCTACTAGGTGGTGTTGGTGTTGGTGGTGGTGGTTATGTTTCATCTTCTTTAAGGAACAACAATGCATCATCATCATATCATGAATCACTTGGAACATTTTCTAATATAACACAAGGTTCTGAGATGAGTCATACAAGACATTTAATGGATCTACTTGGAGCAGCAGCAAATGAGAACAATCACCAAACACAACATGCTCTATCACTTTCTTTAGGTTCTCACATGCTTGTTGATGAGTACAACACAAACCGTTCCTTAAATCAAGGTCTTATGATTAACCCAAGTTACTTCATGTCTGGTCAAGATCAGACACGTTCTGATCAGCCTTGTAATCAACCTGTTGTGGAGAATCTAACAAGTGATTATTTTTATAGTAGTGGTGGAAGTGGAAGTGGAAATGGAAATTTTGGTTCTGGTTCTAATAACTCAATGTTGAACCGTTCTACTTCTACTTCTTATGGAGGTGAGAGTTTTGGTTCTGTTATTGGAAACTCTAGATACCTTAAACCGGTACAATCACTTCTTCAAGATCTTGTTGATGTTGGTGGAAATGTGATTGATAGAATGAATGAAAAGTATGCTGAGAAGTTGTTTCATGGAAGTAGAACTGGTGCTAGAACACTCTCCTCTGAGCTCAAAGCAGAGTTAAGGATTCATGGACATTTATTAGCTGATAAACATGAACATCAAGTCAAAATTGCAAAGTTCATTGCTTTGTTGGATGAGGTTGAGAGTAGATATGAGAAATACTACCATCAAATGGAAGAAGTGGTGTCATCTTTTGAAATGATAGCAGGTTTAGGGGCTGCAAAGTGTTACACTGCTTTGGCACTTCAAGCAATGTCTAGACATTTCTGTAGCTTAAGAGATGCAATAATGTCACAAATAAATGTGGAAAAAAGAAAACTGTTTCAAGATGTTCCAAAAATCAACAGTGGATTGTCTCAACTGAGCTTATTTGAGAAAGATAATAATAATAATAAACAGAATAGAATGTCTCTCCAACAACTTGGAGTCATTCAAAATCAACGACAAGTGTGGAGACCCATTAGAGGATTGCCTGAAACTTCTGTAGCTATTCTTCGTGCTTGGTTATTTGAACATTTTCTTCACCCCTACCCTAATGATTCTGAGAAGTTAATGCTAGCATCCCAAACAGGCTTAACTAAAAACCAAGTGTCAAATTGGTTCATAAATGCAAGGGTACGTCTATGGAAACCAATGATAGAAGAAATGTACAAAGAAGAGTTTGGAGAGTCTTCTGAAGATTCCAACCCAGCAGCTAACAATTACATGTCAAGGGAAGATGCAACTGACTGTGTGGAGGATTAA 1377 0.3711 MSNSMTHQNQFENQELLGGVGVGGGGYVSSSLRNNNASSSYHESLGTFSNITQGSEMSHTRHLMDLLGAAANENNHQTQHALSLSLGSHMLVDEYNTNRSLNQGLMINPSYFMSGQDQTRSDQPCNQPVVENLTSDYFYSSGGSGSGNGNFGSGSNNSMLNRSTSTSYGGESFGSVIGNSRYLKPVQSLLQDLVDVGGNVIDRMNEKYAEKLFHGSRTGARTLSSELKAELRIHGHLLADKHEHQVKIAKFIALLDEVESRYEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAIMSQINVEKRKLFQDVPKINSGLSQLSLFEKDNNNNKQNRMSLQQLGVIQNQRQVWRPIRGLPETSVAILRAWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGESSEDSNPAANNYMSREDATDCVED* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0277 458 Gene3D - 357 437 - -
Tpr7g0277 458 SUPERFAMILY Homeodomain-like 368 429 IPR009057 -
Tpr7g0277 458 SMART HOX_1 362 426 IPR001356 GO:0003677
Tpr7g0277 458 SMART prehox3 171 309 IPR006563 -
Tpr7g0277 458 Pfam Homeobox KN domain 379 418 IPR008422 GO:0003677|GO:0006355
Tpr7g0277 458 Pfam Associated with HOX 176 308 IPR006563 -
Tpr7g0277 458 CDD homeodomain 362 423 IPR001356 GO:0003677
Tpr7g0277 458 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 32 442 - -
Tpr7g0277 458 MobiDBLite consensus disorder prediction 431 458 - -
Tpr7g0277 458 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 32 442 - -
Tpr7g0277 458 ProSiteProfiles 'Homeobox' domain profile. 381 422 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0277 Tpr-Chr7 2265848 2268938 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tpr7g0277 POX 2.9e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0277 7 2265848 2268938 Tpr7g0277 7 2265848 2268938 ECH
Tpr1g3813 1 42132587 42137269 Tpr7g0277 7 2265848 2268938 PCT