Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0276 ATGTATCCCAACCATTCATTCTCTTCGGGGTCCTATACGGATATGTTCACTGCGAATCCTCCTTTGGTACCTCACAACTACTACAATGAATCTGTAGCAGGACAAAATGAAGCTAAGTTTATCACAGCTATGGGTGACACAGTGACTATGCAGTCCATTGATACACATTCCAATGGTTGCAACTCTAATGTAGATTTTGAGCAAAATATGCAGTGTCAAGAGTTATCTCTTAGTCTTGGCACACTATTGCCTTCTACTGCATCTGTCCCTCCATTTCAATATCAGTATCATGACACCGGTTTTGTTTCGCTTATGAATGCTTGTCTCCCAAAGGGAACTACAATATCCAATGATGATGAGTTGAAAAATGTTGAATGTATGGCATCTATATCTTCTGGAGGCTTTCATGACATCACCAAAAGGGACAGTTTTCGCAACGCTGACCCCTCAAATCAATGCCTACAGGGTTCACAAGTTTTTCCTAACATTTTACTAAACTCTCAATATCTTAAAGCTACACAGGAGTTACTTGATGAGATAGTTAATGTCCGAATCCGAAAGCAGCGTGCAATGGAAAAACAAGAAAAAATATGTGACATTGGATTAGATAACTCCAAAGACACTGATGCAAAATCTACTAGTCAGTCTGTGCAAATATCTTCAGCCCCTAATGATTCTAATTCCAATCCTTCTTGCGAATTATCTCCGGCAGAAAGACAAAATTTGTTGGATAAGAAGACCAAGCTTTTGTCCATGTTGGATGAGGTAGATAGAAGATACCGACACTACTGCAATCAGATGCAGATTGTGGTGTCATCTTTGGACATGGTTGCTGGTGGTGGTGCAGCCGAGCCATATACTACACTAGCATTTCGTACAATTTCACGCCACTTTCGCTGCTTGCGCGATGCAATCAGTAGCCAAATTCAAGTAATTCAAAAGAGCCTTGGGGAACAAGAAGGATTTCCTCGTCTGCGGTATGTTGATCAACAGCTTAGAAAGCAAAAGGCACTTCAGCATCTTGGTGTCATGCGACAAGCTTGGAGACCTCAGAGAGGGCTTCCTGAGAACTCTGTCTCAATACTACGCGCTTGGCTCTTCGAACATTTTCTTAATCCTTACCCCAAGGATTCGGAGAAAATAATGCTAGCTAGGCAGACTGGTTTGACAAGGAATCAGGTGGCGAATTGGTTCATTAATGCACGTGTACGTCTTTGGAAACCAATGGTTGAGGAAATATACAAAGAAGAGTTTGGTGATTCTGAAATGAACTGCAATTTTTCATCTGAAAATAATACACTCCAAGGTAAAAGAAATTATACTCAACATGAAATTGATGAAAAATCAGAAGAAGAGTCACAGGACAATGTACAAATTATTACTAGTGATAGTGTACAAGGCTATTCCACTAAAGAACAACATGTAGAAAAAAATGTGATGGATTGTGGAAGTGGAAAATTGCATTGTGATAATGAAAGATTCAGCGTGAAAAATGGCTTTTATTCAGAAATAGGTTGTGATAGTGCCACATATGATTTATCAGAGTTATGTGGTGGCCACAATGTGTCTCTTGCATTGGAGTTGAGGAACTGTGAAAGTGATGTATTAGCCATATCTGATGATACCATTCATAAAAGACATAATAATCAAATATTGGCTTCTTCTTCTTCTTCTTCTGCTTCTGATTTACAAGATTATGATTTCACAGATTCAGGAAAGCAACAACACAGGTTTGGCAATACTCATCTGTTGCATGAGTTTGTTGTATGA 1770 0.3927 MYPNHSFSSGSYTDMFTANPPLVPHNYYNESVAGQNEAKFITAMGDTVTMQSIDTHSNGCNSNVDFEQNMQCQELSLSLGTLLPSTASVPPFQYQYHDTGFVSLMNACLPKGTTISNDDELKNVECMASISSGGFHDITKRDSFRNADPSNQCLQGSQVFPNILLNSQYLKATQELLDEIVNVRIRKQRAMEKQEKICDIGLDNSKDTDAKSTSQSVQISSAPNDSNSNPSCELSPAERQNLLDKKTKLLSMLDEVDRRYRHYCNQMQIVVSSLDMVAGGGAAEPYTTLAFRTISRHFRCLRDAISSQIQVIQKSLGEQEGFPRLRYVDQQLRKQKALQHLGVMRQAWRPQRGLPENSVSILRAWLFEHFLNPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEIYKEEFGDSEMNCNFSSENNTLQGKRNYTQHEIDEKSEEESQDNVQIITSDSVQGYSTKEQHVEKNVMDCGSGKLHCDNERFSVKNGFYSEIGCDSATYDLSELCGGHNVSLALELRNCESDVLAISDDTIHKRHNNQILASSSSSSASDLQDYDFTDSGKQQHRFGNTHLLHEFVV* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0276 589 SMART HOX_1 348 412 IPR001356 GO:0003677
Tpr7g0276 589 Pfam Homeobox KN domain 365 404 IPR008422 GO:0003677|GO:0006355
Tpr7g0276 589 SUPERFAMILY Homeodomain-like 349 414 IPR009057 -
Tpr7g0276 589 Gene3D - 345 422 - -
Tpr7g0276 589 Pfam Associated with HOX 163 306 IPR006563 -
Tpr7g0276 589 ProSiteProfiles 'Homeobox' domain profile. 345 408 IPR001356 GO:0003677
Tpr7g0276 589 MobiDBLite consensus disorder prediction 208 234 - -
Tpr7g0276 589 SMART prehox3 158 307 IPR006563 -
Tpr7g0276 589 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 30 547 - -
Tpr7g0276 589 CDD homeodomain 348 409 IPR001356 GO:0003677
Tpr7g0276 589 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 30 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0276 Tpr-Chr7 2250906 2261987 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tpr7g0276 POX 5.8e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0276 7 2250906 2261987 Tpr7g0276 7 2250906 2261987 ECH
Tpr7g0276 7 2250906 2261987 Tpr1g3813 1 42132587 42137269 PCT