Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0252 ATGACTACTCTTTCACTTTTCCCTCTTCTTCTTCTCCCTCTTGTTATTATTATAACAACCACTCTCACCATTCCGTCTCCGGCTGAAGCCAGGGGCGGACAATGGCAGCTCTTACAAAATAACATCGGCGTTGTAGGTATGCACATGCAGTTACTTCACAATGACCGTGTTATCATTTTCGACCGCACAGATTTTGGCTTATCAAACTTATCCTTATCCAATGGGAGATGCCGTAATAATCCACAAGAACAGGTAGTAAAAAATGATTGTACTGCACACTCTCTTGAATACGACGTTGTTTCTAATACATTCCGGCCTCTGTTTATACAAACCAATGTTTGGTGTTCCTCCGGCTCTGTCTCTCCCAACGGTACTCTTATCCAAACCGGAGGTTTCAACGATGGAGACCGTACTGTTAGAACCTTCAATCCATGTCCAAATTGTGATTGGCAAGAATTTAATGCCGGCCTTGCAGCTCGAAGATGGTATGCCACCAATCACATGCTTCCAGATGGAAGGCAAATTATTATTGGTGGAAGAAGACAATTCAACTATGAATTTTATCCAAAGAAAGATGCCACAGCAAAAAACATATATAGTCTGCCTTTTCTTGTACAAACAAATGATGCTGGAGCTGAGAACAATCTTTATCCTTTTGTTTTTCTCAATGTAGATGGCAATCTTTTCATCTTTGCAAATAACCGTGCTATTTTGTTTGATTATAACAACAACAATGTTGTTAAAACATACCCTTCAATACCAGGTGGAGAACCCAGGAATTATCCTAGTACAGGTTCAGCTGTTTTGCTTCCTTTAAGAAACTTACAAAAGGCTTCAGTTGAAGCTGAAGTAATGATTTGTGGTGGAGCTCCTAAAGGTTCTTTTCAGAAAACACTGCAGGGAAGTTTTATTGGAGCATTGAATACATGTGCTCGAATTAAAATAACTGACCCCAATCCGAATTGGGTTATGGAAACTATGCCGGGTGGAAGAGTCATGAGTGACATGCTTTTACTTCCTAACGGTGACGTTTTGTTAATTAACGGAGCAGCTATGGGGTCCGCTGGTTGGGAATCGGGTCGAAACCCGATTTTGAACCCGTTTCTTTATAAACCAAATGGTGTTAACGGTTCACGATTTCAATTACAAAACCCGTCTAGTATTCCTCGAATGTACCATTCTACAGCCGTGTTGCTTCGTGATGGTAGGGTCCTTGTTGCTGGTAGCAATCCTCACATTGATTATAAATTTGGAAATGTTTTGTTTCCGACGGAATTGCGTTTAGAAGCCTTTTCACCTTCCTATTTAGAGGCCGGATCCGATGATTTACGTCCTACATTGGTGTTTCCTGTACCCCAATCACAAACAAAATTGAAGTATGGTCAAAAGTTGAAGGTTCGATTTCAGATCAAGGCAAAACTGGTGAAAAATTTAGTGTCGGTGACAATGTTGGCGCCGTCTTTTAATACACATTCTTTCTCGATGAATCAAAGGTTGTTAGTGCTTGATGAAGTGAAACCAACAAACAAAGTGAGTAGTAAAATTGTTGTTGGAAAATCAGCATTGGTGTACCAAGTTGAAGTGACAATACCTAGTTCACCCATTCTTGCACCTCCTGGTTACTATTTATTATTTGTGGTCCATCAAGAAATTCCAAGTCAAGGTGTTTGGGTCCAGTTACTATAA 1686 0.4027 MTTLSLFPLLLLPLVIIITTTLTIPSPAEARGGQWQLLQNNIGVVGMHMQLLHNDRVIIFDRTDFGLSNLSLSNGRCRNNPQEQVVKNDCTAHSLEYDVVSNTFRPLFIQTNVWCSSGSVSPNGTLIQTGGFNDGDRTVRTFNPCPNCDWQEFNAGLAARRWYATNHMLPDGRQIIIGGRRQFNYEFYPKKDATAKNIYSLPFLVQTNDAGAENNLYPFVFLNVDGNLFIFANNRAILFDYNNNNVVKTYPSIPGGEPRNYPSTGSAVLLPLRNLQKASVEAEVMICGGAPKGSFQKTLQGSFIGALNTCARIKITDPNPNWVMETMPGGRVMSDMLLLPNGDVLLINGAAMGSAGWESGRNPILNPFLYKPNGVNGSRFQLQNPSSIPRMYHSTAVLLRDGRVLVAGSNPHIDYKFGNVLFPTELRLEAFSPSYLEAGSDDLRPTLVFPVPQSQTKLKYGQKLKVRFQIKAKLVKNLVSVTMLAPSFNTHSFSMNQRLLVLDEVKPTNKVSSKIVVGKSALVYQVEVTIPSSPILAPPGYYLLFVVHQEIPSQGVWVQLL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0252 561 CDD E_set_GO_C 439 560 IPR015202 -
Tpr7g0252 561 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 26 560 - -
Tpr7g0252 561 SUPERFAMILY Galactose oxidase, central domain 96 437 IPR011043 -
Tpr7g0252 561 PANTHER SECRETED PROTEIN-RELATED 26 560 - -
Tpr7g0252 561 Gene3D - 29 443 IPR037293 -
Tpr7g0252 561 Pfam Galactose oxidase-like, Early set domain 454 559 IPR015202 -
Tpr7g0252 561 Pfam Glyoxal oxidase N-terminus 47 289 IPR009880 -
Tpr7g0252 561 Gene3D Immunoglobulins 444 561 IPR013783 -
Tpr7g0252 561 SUPERFAMILY E set domains 441 560 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0252 Tpr-Chr7 2056540 2059019 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0252 7 2056540 2059019 Tpr7g0252 7 2056540 2059019 ECH
Tpr1g3841 1 42444230 42447007 Tpr7g0252 7 2056540 2059019 PCT