Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0249 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCTGATAAGGTTGTGAATGAGAAAACAGCTGCTTCACTAGACTCTGCAGATGCTTCCAATCAGGATAACGGCAAGAAACAGAATTATGTCCAAATCTCTGTGGAATCGTATTCACATCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAACTGAAGACATATGACGAACAATTTCAGACATATGAGGAAAAAGTTCAGACATATGACGAACAAGTTCAGACTTATGAGGAAAAAGTTCAGACACTTGAAGATGAGATCAAGGAAGTGAATGAAAAGCTTTCGGCAGCAAACTCTGAGATTAATACTAAGGAAAGTGTGGTAAAGCAACATGCTAAAGTAGCTGAAGAAGCCGTCTCAGGATGGGAAAAGGCTGAAGCTGAGGCTTTGGCATTGAAAGAACATCTTGAATCTGTCACTCTTTCGAAACTCACTGCTGAAGACCGTGCATCACATTTAGATGGTGCTCTTAAAGAATGTATGCGACAGATACGGAACCTTAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTGTCGAAAACCAAGCAATTGGACAAGATTAAGGGGGAGCTTGAGGCTAAGATAGCTAGCTTTGAACAGGAACTCCTGAGGTCTGCTGCTGAAAACAGGGCGCTGTCAAGGTCCTTGCAGGAACGCTCTAACATGCTTATCCAATTAAGCGAACAAAAAGCTAGTGCCGAGGCTGAAATTGAGCATCTTAAGAGCAACATAGAATCATGTGAAAGAGAAATTAGTTCACTTAAATATGAACTTCATGTTGCTTCGAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGCATGAGGTCTGCAGAAGCTGCTAATAAACAGCATATGGAGGGTGTAAAAAAGATTACCAAGTTGGAAGCTGAGTGCCAAAGACTACGCGGACTTGTTCGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGTTAGAAGTTGAAAATCTTGGCCGAGATTATGGAGAAAGTCGATTAAGGAAATCACCTGTAAAGGCTGCTGCCCCTAATTTGTCCCCGTTACCTGAGTTCTCTCTAGAGAATGTGCAGAATTTCCAGAAGGAGAATGAATTTCTCACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCGTTGGCTAAACGCAACAGCGAATTGCAGGCCTCAAGGAGTACGTGTGCTAAAACACTAAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGACAAGTAACCAGCCGAACGGATCTCCAAAATCCATGATGCATGTAACCCACGAAAGCATTTATAGTCAAAATGCAAGCATTGCACCTAGCTTAGTTTCCATGTCTGAAGATGGAAATGATGATGCAGCAAGTTGTGCCGAGTCTTGGTCTACAACAATGGCATCTGGGCTATCCCAAGTTTCTAAAAAGTTTACGGAGGAATCAAGCAAAGCTGAAGCCATTCAAAAGTTGGAACTAATGGACGACTTTCTGGAGGTGGAGAAGTTAGCTCGTTTGTCAATTGATTCCAACATAGATGCCACAGTTTCATTATCTTCAGACAATAATGCAACTGATGGTGTGACCAATGATGTATCACAAGTCAGTACTGGCACAGTTGGTCTGTCTGAAACAAATGGCGATTCAAATCCTTTGCCAAATCAAGTGTCTTCCAGTGCTTTGACAGCACCTGATCCCCAATCTGATGTTGGTGGCTTATTAACAGAGCTTAGATCAAGAATATTACTGGTTTTCGAGTCCATAGCTAACGATGCTGACATAGGGAAGATCGTTGAGGATATTAAACATGTACTAGAAGAAAAATCCCAGGATGGACAACCTTCTGATGCCACATGTGATAGGCAGAAAAATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGAAACCATTTCATCCCTGCAACCCAAAGAGTATGTGCAGATAACTTCAGATTTAGAAGCTGCAATTTCTAATATTCATGACTTTGTATTGTCACTAGGCAAAGAGGCAATTTCATTTCATGATGTATCTTCTAATGGAAATGAAATGAGCCAAAAGATTGAGGAGTTTTCTGCCACCTTTAGCAAAGTTTTATGCAGCAATGCAAGTCTGCTACAGTTTGTTCTTGACCTGTCTTACGTTTTGGTTAAAGCAAGTGAACTCAGATTTAGTGTCCTTGGATACAAGGGTACAGAAGCTGAAACTAACAGTCTCGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAGACAATTCATCTGGTGAAAGATATCAAAATGGTTGTTCCCGTGTTCTTAATCCATGTTCTGATCCTGAGGTTCCTGATGACGGAAATTTGGTTTCGGGCTATAGAGCGATTGTGGCATCACAAAAACCGTCATTCGAGGAATTTGAAGAACTGAAACTGGAGAAAGAGAAAGTAGCAACAGATCTGTCAATATGTACCGAGAATCTCGAATTGACCAAGTCTCAATTGGTAGAAACTGAGCAACTTCTAGCAGAAGTTAAATCACAGTTGGCTTCTGCTGAAAGATCAAATAGTTTGGCTGAGACGCAGCTAAAGTGTATGGCAGAGTCATACAAGTCACTTGAAACACGTGCTCAGGAGTTTGAAACTGAGCTGAACCATTTGCAAAGTACGATAGAAACTCTGGAGAATGAACTTCACAATGAAAAGACAGCTCATGAAGCTGCTTTAGCGAAGAGCAAGGAGCTAGAAGAGCAGTTACTAAGGATTGAGAGCTTAACCGCTGAAAATGAAGTCAAATCTACACAGGAGAAAGATTTGGCAGCAGCCGCCGAAAAGCTAGCCGAGTGTCAAGAAACCATATTCCTTTTGGGAAAGCAGTTAAATGCTATACATCCTCAAAGTCAACCAATTGAGTCTCCTTACAACAACACAAGTCCAAATACTACTAGTAGCTCAAATCTTCAAGAAGTAGGTCAATCGGAAATGGATACTGCCACTTCTTCTTTTGTGCAAAGACTGAGTTCGGATTCCCCCTTGCATTTTTCCAATGGTTTATTTGTCCCATCAGATAACGATTCAAACGTTCCGGCCAGATCTCCGGCACCGCTTCCAAAATCAAAACCAAAACACAGACCTACCAAGTCAGCCTCTTCAACTTCTTCCGTCACTACGCCGGAGAAGCAACGGGGATTTAGTAGATTCTTTTCATCAAAAGGGAAGCCTGGTTATTGA 3264 0.4139 MDRRWPWKKKSSDKVVNEKTAASLDSADASNQDNGKKQNYVQISVESYSHLTGLEDQVKTYEEKLKTYDEQFQTYEEKVQTYDEQVQTYEEKVQTLEDEIKEVNEKLSAANSEINTKESVVKQHAKVAEEAVSGWEKAEAEALALKEHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIASFEQELLRSAAENRALSRSLQERSNMLIQLSEQKASAEAEIEHLKSNIESCEREISSLKYELHVASKELEIRNEEKNMSMRSAEAANKQHMEGVKKITKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKAAAPNLSPLPEFSLENVQNFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSTCAKTLSKLQSLEAQLQTSNQPNGSPKSMMHVTHESIYSQNASIAPSLVSMSEDGNDDAASCAESWSTTMASGLSQVSKKFTEESSKAEAIQKLELMDDFLEVEKLARLSIDSNIDATVSLSSDNNATDGVTNDVSQVSTGTVGLSETNGDSNPLPNQVSSSALTAPDPQSDVGGLLTELRSRILLVFESIANDADIGKIVEDIKHVLEEKSQDGQPSDATCDRQKNPEDAGLNLEKETISSLQPKEYVQITSDLEAAISNIHDFVLSLGKEAISFHDVSSNGNEMSQKIEEFSATFSKVLCSNASLLQFVLDLSYVLVKASELRFSVLGYKGTEAETNSLDCIDKIALPENKLVQDNSSGERYQNGCSRVLNPCSDPEVPDDGNLVSGYRAIVASQKPSFEEFEELKLEKEKVATDLSICTENLELTKSQLVETEQLLAEVKSQLASAERSNSLAETQLKCMAESYKSLETRAQEFETELNHLQSTIETLENELHNEKTAHEAALAKSKELEEQLLRIESLTAENEVKSTQEKDLAAAAEKLAECQETIFLLGKQLNAIHPQSQPIESPYNNTSPNTTSSSNLQEVGQSEMDTATSSFVQRLSSDSPLHFSNGLFVPSDNDSNVPARSPAPLPKSKPKHRPTKSASSTSSVTTPEKQRGFSRFFSSKGKPGY* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0249 1087 Coils Coil 163 223 - -
Tpr7g0249 1087 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 90 - -
Tpr7g0249 1087 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 87 1086 - -
Tpr7g0249 1087 Coils Coil 839 936 - -
Tpr7g0249 1087 Coils Coil 374 401 - -
Tpr7g0249 1087 MobiDBLite consensus disorder prediction 1 37 - -
Tpr7g0249 1087 MobiDBLite consensus disorder prediction 1 16 - -
Tpr7g0249 1087 SUPERFAMILY Tropomyosin 817 982 - -
Tpr7g0249 1087 Coils Coil 943 963 - -
Tpr7g0249 1087 MobiDBLite consensus disorder prediction 1031 1087 - -
Tpr7g0249 1087 Coils Coil 51 120 - -
Tpr7g0249 1087 MobiDBLite consensus disorder prediction 1057 1075 - -
Tpr7g0249 1087 MobiDBLite consensus disorder prediction 977 1009 - -
Tpr7g0249 1087 MobiDBLite consensus disorder prediction 17 37 - -
Tpr7g0249 1087 Gene3D - 38 135 - -
Tpr7g0249 1087 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 90 - -
Tpr7g0249 1087 PANTHER FILAMENT-PLANT-LIKE PROTEIN 87 1086 - -
Tpr7g0249 1087 Pfam Filament-like plant protein, long coiled-coil 117 979 IPR008587 -
Tpr7g0249 1087 Coils Coil 231 297 - -
Tpr7g0249 1087 SUPERFAMILY Tropomyosin 48 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0249 Tpr-Chr7 2026939 2032526 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0249 7 2026939 2032526 Tpr7g0249 7 2026939 2032526 ECH
Tpr1g3861 1 42740438 42746287 Tpr7g0249 7 2026939 2032526 PCT