Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0219 ATGTGTACCTTAATGTTGTTATGCTTAATATTATTATTGGGAGTTTCTTGTATCGTGGCAACATTAGAACTACCACCAAATGTTACATTTCCAGCTGTGTTTGTGTTTGGAGATTCTATCATGGATACAGGTAACAACAACAATAACATGAAAACATTTGCTAGGTGCAATTTTCCTCCATATGGAAAAGATTTCAATGGAGGTGTTCCAACTGGTCGCTTTGGCAATGGAAAAGTTCCATCAGACCTTATAGTTGAAATATTGGGCATTAAGGAACTTCTGCCTGCGTATTTGGATCCAAATATCCAGCCAAGCGATCTCATCACCGGCGTTTGCTTTGCATCCGGTGGTTCCGGATATGATCCTCTCACATCCAAAATTGCGGCAGCTATATCATTGTCAGATCAAATAGATATGTTCAAAGAATACATAGGAAAGCTAAAAGGACTTGTTGGAGAGGATAGAACAAAATTCATCTTAGCCAATAGTGTTTTTCTTGTGGTTCAAGGAAGCAACGACATTTCCAACACTTATTTTTTGACTCATGCTAGACAACTACAATATGATGTTCCTGCTTACACTGACCTCATGCTCAACTCTGCTTCCAATTTCTTAAAGGAAATATATGAATTGGGTGCACGAAGGATAGGAGTATTTAGTGCTCCACCGATTGGTTGTGTGCCATTTCAGAAAACAATTCTTGGAGGAGTGGAAAGAAAATGTGCAGAAAAATACAACGATGTATCCAAGTTATTTAACACTAAATTGTCAATGGAGCTGGATTCCCTTAACCACAACTTGCCCAATTCAAGGATGGTTTACCTTGATGTTTATAATCCTCTTCTTGACATCATTGTAAATTATCAAAATTATGGTTATAAAGTCGGAGACAAAGGATGTTGTGGAACGGGTGAAGTAGAGGCAGCAATATTATGCAACCAATTTGCTCCTCCGTGTGAAGATGTTAGGGACTATGTTTTTTGGGACAGTTTTCATCCATCACAGAGTGTTTACAACAAGCTCGTCGATCCTCTTCTTCAAAAATATATGCACCAATTCTTCTAG 1065 0.3822 MCTLMLLCLILLLGVSCIVATLELPPNVTFPAVFVFGDSIMDTGNNNNNMKTFARCNFPPYGKDFNGGVPTGRFGNGKVPSDLIVEILGIKELLPAYLDPNIQPSDLITGVCFASGGSGYDPLTSKIAAAISLSDQIDMFKEYIGKLKGLVGEDRTKFILANSVFLVVQGSNDISNTYFLTHARQLQYDVPAYTDLMLNSASNFLKEIYELGARRIGVFSAPPIGCVPFQKTILGGVERKCAEKYNDVSKLFNTKLSMELDSLNHNLPNSRMVYLDVYNPLLDIIVNYQNYGYKVGDKGCCGTGEVEAAILCNQFAPPCEDVRDYVFWDSFHPSQSVYNKLVDPLLQKYMHQFF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0219 354 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 14 352 - -
Tpr7g0219 354 Gene3D SGNH hydrolase 24 350 IPR036514 -
Tpr7g0219 354 Pfam GDSL-like Lipase/Acylhydrolase 33 343 IPR001087 GO:0016788
Tpr7g0219 354 PANTHER GDSL ESTERASE/LIPASE EXL3 14 352 - -
Tpr7g0219 354 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 33 44 IPR008265 GO:0006629|GO:0016298
Tpr7g0219 354 CDD SGNH_plant_lipase_like 31 349 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0219 Tpr-Chr7 1794961 1798040 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0219 7 1794961 1798040 Tpr7g0219 7 1794961 1798040 ECH
Tpr1g3890 1 43035302 43041440 Tpr7g0219 7 1794961 1798040 PCT
Tpr7g0219 7 1794961 1798040 Tpr1g3888 1 43021120 43024080 PCT