Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0206 ATGGTTACGTCCGCAGCTGATTCTTCCGCTATTAACCCTGCCGCCACCAATACCCCTAATTTCCCGCGAAAAAACCTAACTTCTCCGTGGGCACAGGTTGTTCGCGGTGCTGATTCCGAACCACTCAACAATCAATCGCCTCCGCCTCCGCCTCCGCCACAGCAGCAGCAGTCTTCATCATCATCATCATCATCGTCTCTCGATTCGGCCAATTTAGTTGCTGCTATTACTGCTGTTGCTGCTATTGCCGTAGATAACTCCAATGCTGATAAGAATAACAACAATGCAGGTAACCCTAAGAAACCTGCTTGGAAGAATGCATCCAATGGCGTTGTTGCTGAGGTGGTGAGTCCTGTCATGGGTGCTGTCTCTTGGCCCGCTTTATCTGCTAAAGGTTCTGCTAAATTCACATCTGATTCCTCCTCCGCTGTCACCGTCGCCGCCGAAGGATCAATCTCCATTCCGCAGGGACCTGTTACTTCAAATTCCCCTCATAAACAAGCCACGGGCAATGCCAATGCTAATGCTAATGCGAAACCTACTCCTCCAATGAACCACGGTGGGACAAATAGACAAAAACCAACGAAGCGCGGAGGAGGCAACAGTAGTAGCAATGAGCCCGCTCCCTTTCCAAACAGCTTCTCCAATCCACCTTATGTTAATCTTCAACCATCAGCTGCTCCTCCACCATATCCGGTGGTTCAGATTCCTTCTAACACTGCCTTTGCTGACGGGGTTCAGTCATACAGGAACAACAATGGCTGGAGTCCAAGATCACCAGTTGCACCAGTTGGGGGTTATGGACTGCCTGTGGATGAGCACAGGAACCCCTCTCGCAGGGGTAATTATGGGAACCGTCCACATAACAATTCCGGTATTAGACGCAATCAAGATCCGGGAAATATAGTAAACACTAGAGATGCTCATGCACATCAACATAGGATGCACTCAGGGGGATTTGTGAGGCCTACACTACATAATTCTCCTTCATATTTAGGGTCTCCGTCTATGAGACCCTTTGTAAACAATTTTGGATTTCATGAATTCTATTATTATCCCACGCTACAATTTGAACAATTTGGAGGTATGCCATTCTTGACACATCCACCTCCTCCTGCGATGTTCATTCCGATTCCTCCAGAAACTCTTGAAACTCCTGCAGAAGCAACTTCCGCAGAAACTCCCTTGACCAGTTTAATACTCAAGCAAATTGAGTATTACTTTAGTGATGTTAATCTAGCGAACGATGCCTTTTTGAAGTTCAACATGGACGAACATGGTTGGGTTCCAATTACTTTGATTGCAAACTTCCCCCGAGTTAAAAAATTGACAAACAACATTGAGTTGATTTTGGATTCCTTGAGAAGTTCAAAAGTTGTGGAAGTGCATGGTGATAAGATGAGGAGGCGTAATGAGTTGATGAGATGCTTGCCCTCTGCACACCAACACCAACTTGCTAGTTCTGGTTCAGTATCCCCAAGCGGCATAGTTGCTGATTTCGATAAGATCACTTTGGACGAAGCAACTGGCCATAAAATTTCCAATGCTACCACAAATGTGGGTTCTGCATGA 1572 0.4631 MVTSAADSSAINPAATNTPNFPRKNLTSPWAQVVRGADSEPLNNQSPPPPPPPQQQQSSSSSSSSSLDSANLVAAITAVAAIAVDNSNADKNNNNAGNPKKPAWKNASNGVVAEVVSPVMGAVSWPALSAKGSAKFTSDSSSAVTVAAEGSISIPQGPVTSNSPHKQATGNANANANAKPTPPMNHGGTNRQKPTKRGGGNSSSNEPAPFPNSFSNPPYVNLQPSAAPPPYPVVQIPSNTAFADGVQSYRNNNGWSPRSPVAPVGGYGLPVDEHRNPSRRGNYGNRPHNNSGIRRNQDPGNIVNTRDAHAHQHRMHSGGFVRPTLHNSPSYLGSPSMRPFVNNFGFHEFYYYPTLQFEQFGGMPFLTHPPPPAMFIPIPPETLETPAEATSAETPLTSLILKQIEYYFSDVNLANDAFLKFNMDEHGWVPITLIANFPRVKKLTNNIELILDSLRSSKVVEVHGDKMRRRNELMRCLPSAHQHQLASSGSVSPSGIVADFDKITLDEATGHKISNATTNVGSA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0206 523 MobiDBLite consensus disorder prediction 282 296 - -
Tpr7g0206 523 MobiDBLite consensus disorder prediction 1 67 - -
Tpr7g0206 523 PANTHER LUPUS LA PROTEIN-RELATED 38 514 IPR045180 -
Tpr7g0206 523 CDD LAM 400 470 - -
Tpr7g0206 523 Gene3D - 386 480 IPR036388 -
Tpr7g0206 523 Pfam La domain 400 455 IPR006630 -
Tpr7g0206 523 MobiDBLite consensus disorder prediction 275 296 - -
Tpr7g0206 523 ProSiteProfiles La-type HTH domain profile. 390 479 IPR006630 -
Tpr7g0206 523 SUPERFAMILY "Winged helix" DNA-binding domain 393 477 IPR036390 -
Tpr7g0206 523 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g0206 523 SMART la 394 472 IPR006630 -
Tpr7g0206 523 MobiDBLite consensus disorder prediction 175 207 - -
Tpr7g0206 523 PANTHER LA-RELATED PROTEIN 1B 38 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0206 Tpr-Chr7 1714137 1718470 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0206 7 1714137 1718470 Tpr7g0206 7 1714137 1718470 ECH
Tpr1g3897 1 43097996 43102653 Tpr7g0206 7 1714137 1718470 PCT