Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1185 ATGATGAAGGAGTGTGATTTTCACTACGCTGCGACTGTAATGCATAAACCTAAGAAACGGTTAAGGGAATTCGGTGACGCCGCTGATTCTCACTGTTACTCACTCGCTGATCAATGTGGTTTGCGTCTTCGCCGTCGGATCAACGGTGACTGGGTCCCACCTCTCCTTCCACCACAGGAAAAACCACCTGAGATGAAGAAAAAGGTTAAGCTCATAATCAAATTCACGGGGAAGTCAAAAAACGAGTCCAAATTTAAAAAGGGGGAAACAGTGGAAGTTAGCGACGGCAATGAAGGTTATAAAGGTGCTTGGTTTGTGGCTACTGTTATTGACACATTAGAAAAAGAAAGGTTTCTAGTTGAATACAGAGATTTGGTGACAAATGATGATGGTACTCGACCCCTGAAAGAAGAAATTGATGCTAAGTTTATTAGGCCTTCTCCTCCTTATGTTCCAAATTTTGGTTCTTTCAAAAAGTTACAAGAAGTTGATGCATGGTACAATGATGCTTGGTGGGAAGGTGTGGTTGTTGAATTAGTGAACACGACAGAGTGTTCTGTTCGTTTTATGAACAATGAAGTGTTGAAAATTGAATGTTCGAAGCTAAGACCTCATCAAGATTGGATTAATGGAAAATGGATCATGTCTTCTAAGGAGCCGAGTGAGCTAGTGAAGAAGTTTGGAGATGTGATGCCAAAAGCCAACAATCTAGCCGGAACAAAGTTGATTTTGAAATATCCGATTCCTTGTGAGAATGCAAAGCAACCTACAGCTGTAATAACAAGGACACTATACACTGGAAGCAAATTTGATTTACATTTCTACAAAGGGGAAAAGGTAGAAATTCGAAGTGATGAAAAAGGCTATGAAGGTTCATGGTATACAGCAACTGTTGTCGATTTCTTGCATAATGGAAAGTACTTGGTGGAGTATTTGACACTGAAAACAGAGGACTTAACAGAACCACTGAAAGAAGAAGTAAATGTTTCGGATATTAGACCGTGTCCGCCTGAAGTTGATCGTTTTTGTCGATATGTGACACGCCAAAGGGTTGATGTTTGGTTTAATGATGGATGGTGGGAAGGTGTAGTATCTAATGTTGCTTATGGTTTCAATGGTTTCGAGTATAAGGTTTATTTTTGGACTTCAAATGAGGAGCTGGAATTTGAACACTGTTATCTTAGGCCTCATCAAGATTGGATTGATGGAAGATGGATGCTTGCTTCTTTGGTATGA 1236 0.4005 MMKECDFHYAATVMHKPKKRLREFGDAADSHCYSLADQCGLRLRRRINGDWVPPLLPPQEKPPEMKKKVKLIIKFTGKSKNESKFKKGETVEVSDGNEGYKGAWFVATVIDTLEKERFLVEYRDLVTNDDGTRPLKEEIDAKFIRPSPPYVPNFGSFKKLQEVDAWYNDAWWEGVVVELVNTTECSVRFMNNEVLKIECSKLRPHQDWINGKWIMSSKEPSELVKKFGDVMPKANNLAGTKLILKYPIPCENAKQPTAVITRTLYTGSKFDLHFYKGEKVEIRSDEKGYEGSWYTATVVDFLHNGKYLVEYLTLKTEDLTEPLKEEVNVSDIRPCPPEVDRFCRYVTRQRVDVWFNDGWWEGVVSNVAYGFNGFEYKVYFWTSNEELEFEHCYLRPHQDWIDGRWMLASLV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1185 411 Gene3D - 264 342 - -
Tpr5g1185 411 Gene3D - 73 154 - -
Tpr5g1185 411 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 23 411 - -
Tpr5g1185 411 Pfam Agenet domain 277 337 IPR008395 -
Tpr5g1185 411 Pfam Agenet domain 88 149 IPR008395 -
Tpr5g1185 411 SMART agenet_At_2 155 210 IPR014002 -
Tpr5g1185 411 SMART agenet_At_2 343 402 IPR014002 -
Tpr5g1185 411 SMART agenet_At_2 272 340 IPR014002 -
Tpr5g1185 411 SMART agenet_At_2 83 152 IPR014002 -
Tpr5g1185 411 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 23 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1185 Tpr-Chr5 23315800 23318569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1185 283 411 PHD Transcription Factor Family AT5G58610 30.128 3.30e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1185 - - mtr:MTR_2g033390 542.347