Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0706 ATGCCGGATATTGAGAAGTTAAATAACAAAGGATCTACAAAATCCAATAACTCAAAGGAACATATTGAGTTGAAGGTAGATTCGCCGCGACTCAAAAAAAGTAGCACAAAACTCCAAGAGAAGAAACACAAACTGAAATCAAAATCTCATAAACTCAGTGGCTGCACAAATGCGCCAGAGAGGACAGCTACTAATGATTCTTCTAACAAGGCACCAAACAAGAAGAACGATTCTTCAAATAAAAGATTGATTATTAGAAAAAATCTTCATAAAACTGATCGGAATTCTTCACCGGTGCAGCCGTCAACAAAAATACAAGGAGGACAAATTTCTCTTAATAATCCTAGGAAACGTGAGAAACATGTTGATGAGGAGGCAAATATTCAAAAACGTAAGAGAAGGAGAAAGAAGAAAAAACAAAAACAAAATGTAGATCTTGATGATACTTCACGCCTCCAAAGAAGAACAAGGAATCTCTTAATCAGAATGAAGCAAGAGCAGAACCTTATTGATGCTTACTCCGGAGAAGGTTGGAAAGGTCAAAGTCGAGAGAAGATTAGGCCAGAAATGGAGCTACAAAGAGCAAAGAAGCAGATTTTAAAATGCAAGCTTAGTATCCGTGATGCCATTCGCCAGCTGGATTCTCTTAGTTCAGTTGGTAGCATTGAAGGTTCTGTCATTGCTAAGGATGGATCTGTTTCTCATGAACATATATTCTGTGCAAATTGCAAGATGAACGAAGCTTTTCCAGATAATGATATTATACTCTGTGATGGCACATGTAATCGTGCGTTTCACCAGAGATGTCTTGATCCTCCTTTGGATACTGAAAACATTCCTCCTGGAGACCAAGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATAGAAATACTAGAGGCAACAAATGCGCATCTCGGGACTCGTTTCTCCTTAGACAGTACTTGGCAGGATGTATTCAAGGAAGAGGCTGCTATTCCTGACGGAGATGATGCATTACTAAATCAAGAAGAAGAATGGCCGTCAGATGATCCTGAAGACGATGACTATAATCCAGAGGGGAAAGAAGACAGCCACGACGGCATCAACACAGAAGGAAATGATGAAAATGCATCTGATGATTCAAGTAGTTCTGGCAGTATGTGGTCTTTAAATGGAGAATGTTCTCTGTTAGATGAAGGCATCAACCTTGAATATTATTCTGTTAACGGCCACGTAGATTCTGATGAATCCGGGGAAATAGCATGCGGCCGTAGGCAGCGAAGAGCTGTTGACTACAAGCAGCTTTATGATGAAATGTTTGGGAAGGATGCTCTTCCATATGAACAAGTGAGTGAAGACGAAGATTGGGGTCCTGGAAAAAGACGGCGAAGAGAAAAGGAATCTGATGCAGTTAATACTCTTATGACTCTGCATGAAAGTGAAAATAAACATCCGAATAAAGAGAAGAAAGATAGAATAAGAGGGGATTCTTCAGGCATAAAAAGACCTTGTTTCAGGCTTCCACATGATGCAGTTCAGAAGCTTCGCCAGGTTTTTGCAGAGAATGAGCTTCCTCCAAAATCTGTGAAGGATGCCCTTTCGCAAGAATTGGGAATTGATGCTGCAAAGGTTAACAAATGGTTCAAAAATGCACGTTACATGGCACTTAAAATGAGAAAGCATCGAGAAGGAGAAGAACAGCCTCAAAGTCTCGCTTCTAAGACCTCAAAGGATTCTACGTCACAACATGTGCAGAAAGATGAGATTTTGAAACCGGAAGTCTCAAAAATTACCGTGGTTCATTCTCAGAAGAAGATTGAAAATGTCACTGACAAAGAGAAAACAAAGGCATCCAGCAGTCCCTTGAAGAAAAAGCGAAAGCGACCCGAAATACCTCCACCCTTGAGTGAAAATGGCAACAAGGAATCAATGGAGGTCAATGATGATTTCAACGAAGATGTTAGCTTGATGAAACTGTTGAAAGAAAGGAAAAAGAAGGTAGGTTTTGCATTCGAAGGAAACTCTGAGGCAGCCGAGATAGAATTCGAAAGACTCAGCAAAGTAAAGATGAAACTAGATAGATTGAAGCAAAAATTAAGTCAAGTTCAAAATTCCAGATCAAAGGGTTCAGATGAAGTTTATTTGAATGAGCCATCTATTATTTATGTACCAGTAGCTGAGTTAAGGGAAAAAGTTAAATAG 2181 0.3961 MPDIEKLNNKGSTKSNNSKEHIELKVDSPRLKKSSTKLQEKKHKLKSKSHKLSGCTNAPERTATNDSSNKAPNKKNDSSNKRLIIRKNLHKTDRNSSPVQPSTKIQGGQISLNNPRKREKHVDEEANIQKRKRRRKKKKQKQNVDLDDTSRLQRRTRNLLIRMKQEQNLIDAYSGEGWKGQSREKIRPEMELQRAKKQILKCKLSIRDAIRQLDSLSSVGSIEGSVIAKDGSVSHEHIFCANCKMNEAFPDNDIILCDGTCNRAFHQRCLDPPLDTENIPPGDQGWFCKFCECKIEILEATNAHLGTRFSLDSTWQDVFKEEAAIPDGDDALLNQEEEWPSDDPEDDDYNPEGKEDSHDGINTEGNDENASDDSSSSGSMWSLNGECSLLDEGINLEYYSVNGHVDSDESGEIACGRRQRRAVDYKQLYDEMFGKDALPYEQVSEDEDWGPGKRRRREKESDAVNTLMTLHESENKHPNKEKKDRIRGDSSGIKRPCFRLPHDAVQKLRQVFAENELPPKSVKDALSQELGIDAAKVNKWFKNARYMALKMRKHREGEEQPQSLASKTSKDSTSQHVQKDEILKPEVSKITVVHSQKKIENVTDKEKTKASSSPLKKKRKRPEIPPPLSENGNKESMEVNDDFNEDVSLMKLLKERKKKVGFAFEGNSEAAEIEFERLSKVKMKLDRLKQKLSQVQNSRSKGSDEVYLNEPSIIYVPVAELREKVK* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0706 726 Gene3D - 493 560 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 51 74 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 75 93 - -
Tpr5g0706 726 Pfam Homeodomain 502 546 IPR001356 GO:0003677
Tpr5g0706 726 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 288 IPR013083 -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 351 365 - -
Tpr5g0706 726 ProSiteProfiles Zinc finger PHD-type profile. 237 294 IPR019787 -
Tpr5g0706 726 PANTHER POLYCOMB PROTEIN PCL 9 701 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 16 35 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 1 151 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 473 489 - -
Tpr5g0706 726 Coils Coil 678 705 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 468 489 - -
Tpr5g0706 726 SMART PHD_3 239 292 IPR001965 -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 338 379 - -
Tpr5g0706 726 SUPERFAMILY FYVE/PHD zinc finger 231 296 IPR011011 -
Tpr5g0706 726 CDD homeodomain 494 555 IPR001356 GO:0003677
Tpr5g0706 726 Pfam PHD-finger 239 294 IPR019787 -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 598 640 - -
Tpr5g0706 726 SUPERFAMILY Homeodomain-like 494 560 IPR009057 -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 36 50 - -
Tpr5g0706 726 ProSitePatterns Zinc finger PHD-type signature. 240 291 IPR019786 -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 598 625 - -
Tpr5g0706 726 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 9 701 - -
Tpr5g0706 726 ProSiteProfiles 'Homeobox' domain profile. 491 551 IPR001356 GO:0003677
Tpr5g0706 726 SMART HOX_1 493 555 IPR001356 GO:0003677
Tpr5g0706 726 MobiDBLite consensus disorder prediction 114 130 - -
Tpr5g0706 726 CDD PHD_PRHA_like 239 291 IPR045876 -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 94 113 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 553 583 - -
Tpr5g0706 726 MobiDBLite consensus disorder prediction 444 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0706 Tpr-Chr5 11808117 11814467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0706 139 587 Homeobox Transcription Factor Family AT4G29940 56.803 4.39e-163 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Tpr5g0706 Homeodomain 3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0706 - - gmx:100787118 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0706 5 11808117 11814467 Tpr5g0706 5 11808117 11814467 ECH