Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4964 ATGGAAGAATATTCCATGAGACTCAAAATATCATTTATTGTGAGTTTTATAGCTTTGCCTATAGTTTTCATGGTTACCTTAATGTACCAAAACTCTAGTTTTGGGCTATTTGAAGGGTTTTCAAAAGGCATGGCAATTGGAGGAATGAATCAAAAGAATTTTACAATTGGAGTACCAAATGTTACAGCTAATAATGAGTTTGGATTGAGATCACTTGACAACTTTGAAGGAAGAAACAAGAGTGCTGTCAAAATCAAAAGCTCCAAAAGTATCCCATTGACAAATTCAACTTCAACTCCATCTAAAGAGATCAATGATGATGAGAAAGACAAATTGCTTGATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTAAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGCAAATTCTAAAAATAATAGTAAAAAATCTGCTGCAACAACTTGCAAATACATTATTTGGTTACCTGCAAATGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTTTACGCACTCCTAACAGATCGTGTCTTGGTAGTACAATTCGGGAAAGATAAAGAAGGTTTATTTTGCGAACCATTTCTAAATTCAACATGGTTACTACCGGAGAATTCCTCCTTTTGGGATGCGCAAAATGTTGTAACATATCAAAGCATGGAAATGACTAATACATCAAATGAATATTTGCCATCAGCTATGTATGTGGATCTAAAATACAGTCCTACAAATGATGAGAGATTTTTTCACTGTGACCACAATCAATTTCTTCTCAGTAAAATACCTCTACTGTTTTTGGAAGCAGGTCAGTATTTTGTACCATCATTTTTCATGACACCAATTTTCAAAGATGAGTTAAACAAAATGTTTCCGGAAATTACCTCAATTTTTCACCATTTGGGACGATATCTATTTCACCCCGCAAATGAAGCATGGGAACTAATTACTAGTTTCTATCAACAACACCTTGCTAAAGCAAATGAGAGAGTCGGGCTTCAAATAAGAGTGGTTAATCCATATTCAACTCCACACCAAGTTGTTATGAATCAAATTTTGAATTGCACATTAGAGAATAAGTTACTTCCAAAAGTACGTGGTACAAAAAATATGTCAGTGTCTTCTAGTGACAAAAACAAGACGATTAAAAAGTTTGTTCTTGTGACATCTTTATTTCAACAATATGGAAAGAATTTAACGAATATGTATCAGAATAAATCAACGGTTACCGGGGAAGTAATCGAGGTTTATCAACCAAGTAGTGAAAAGGAACAAAAATTTGGTGATAACAAGCATAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGTTGGTGACTACATATCAATCAACTTTTGGTTATGTTGCTAAGGCTTTGGGAAATTCAATACCATGGATTCTTTACAATCCTGTTCATAATACAAATAAGGAGATTTGTGAACGTGAATTTACATTAGAGCCTTGTTATCATTATCCTCCTTTACATTATTGTGATGATGGAAAGGTTATTCAAGATGTTGCTTCTTCTTTTCATAATATTAGACATTGTAAGGATTTTCCTTTTGGTTTGAAGCTGGTTAACACTTCTGTTTAG 1734 0.3333 MEEYSMRLKISFIVSFIALPIVFMVTLMYQNSSFGLFEGFSKGMAIGGMNQKNFTIGVPNVTANNEFGLRSLDNFEGRNKSAVKIKSSKSIPLTNSTSTPSKEINDDEKDKLLDGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNKDMKIIANSKNNSKKSAATTCKYIIWLPANGLGNQIISMASSFLYALLTDRVLVVQFGKDKEGLFCEPFLNSTWLLPENSSFWDAQNVVTYQSMEMTNTSNEYLPSAMYVDLKYSPTNDERFFHCDHNQFLLSKIPLLFLEAGQYFVPSFFMTPIFKDELNKMFPEITSIFHHLGRYLFHPANEAWELITSFYQQHLAKANERVGLQIRVVNPYSTPHQVVMNQILNCTLENKLLPKVRGTKNMSVSSSDKNKTIKKFVLVTSLFQQYGKNLTNMYQNKSTVTGEVIEVYQPSSEKEQKFGDNKHNLKAWVEMYLLSLSDVLVTTYQSTFGYVAKALGNSIPWILYNPVHNTNKEICEREFTLEPCYHYPPLHYCDDGKVIQDVASSFHNIRHCKDFPFGLKLVNTSV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4964 577 Pfam Xyloglucan fucosyltransferase 99 544 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr4g4964 577 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 3 576 - -
Tpr4g4964 577 Gene3D - 356 530 - -
Tpr4g4964 577 PANTHER FUCOSYLTRANSFERASE 2-RELATED 3 576 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr4g4964 577 Gene3D - 187 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4964 Tpr-Chr4 60357801 60359945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4964 110 573 Xyloglucan Fucosyltransferase1 AT2G03220 46.610 1.90e-145 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4964 K13681 - gmx:100818288 634.024