Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4963 ATGGTAGCATATTCTAGGAGACTCAAAATGTCCTTTATTGTGAGTTTGATGGCATTGCATATAGTTATCATGGTTACTATAATGCACCAAAGCTCTAGTTTTGGGCTATTTGAATGGTTTTCACAAGGCATGGCAATGGGAGGAATGACTCATGTGAACGTTAAAGAACCAAATGTTACAACTAATGAGTTTGGATTGAGACAAAATGTAGCACTTGACAACTTTGTAGGAAGACACAAGGGTGATGCCAATTTCAAAAGCTCCAAAAGTATCCCATTGACAAATTCAACTTCAACTCCATCTAAAGAGATCAATGATGATGAAAAAGACAAATTGCTTGATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCAATATTTGATATCTAAACTGAGAAAATATGAAGAACTTCATAGAAGGTGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGCAAACTCTAAGCAAAATGGTACTCATTGTGCTGCAACAACATGCAAATACATTATTTGGGTACCTGTAAATGGTTTAGGTAACCAAATAATTAGCATTGCTTCATCATTTCTTTACGCGCTCCTAACGGATCGTGTTATGCTCGTACAATTTAGAAAAGACAAAGAAGGTTTATTTTGCGAACCATTTCTAAATTCCACTTGGTTGTTGCCGAAAGATTCTCCTTTCTGGAATACAGAAAATGTTCAAAGTTATCAAAGTATAATTGAGATGGAAATGAATAATACATTGAACGAAGATTTGCCATTAGCTATGTTTGCGGATCTAAGTTTTTCCTATACATTTGAAGAGAGATTCTTTCACTGTGATCACAGTCAATTTCTTCTCGGTAAAATTCCTTTGTTGTTTTTGAAATCAAGTACGTATTTTGTACCTTCATTTTTTATGACACCAATTTTTGAAAAAGAGTTAAGAAAAATGTTTCCGGATATAACTTCGATTTTTCACCATTTGGGACGTTACCTTTTTCGCCCTGCAAATGAAGCATGGGAACGAATCACAAATTTCTATCAACAATACCTTACTAAAGCAAATGAGAGAGTAGGACTTCAAATAAGAGTTTATGATCCTAATTCAACTCCACACCAAGATGTTATGAATCACATTTTGAATTGCACATTAGAGAATAACTTACTTCCAAGAGTACTTGGTACGAAAAATACATCACTGTCAACTTCTAGCGGAAAAAACAAGACAAACACAAAAGTTGTTATTGTGGCGTCATTATATCCGCAATATGGAAACAATTTAAATACAATGTATCAGAATAAATCAACGGTTACCGGAGAAGTAATTGAGGTTTATCAACCAAGTGGTGAAGGGAAACAAAAATTTGGTGATAACAAGCATAATATGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATGTGATGTGTTGGTGACTACATCACAATCAACTTTTGGTTATGTTGCTAAGGGTTTAGGAAATTCAAGACCATGGATCCTTTACAATCCGGTTAATAATCAAACTAAGGAGATTTGTGAACGTGAGTTTATAGTGGAGCCTTGTCATAAATATCCTCCATTACATTATTGCAATGGAACAACCATTGAAGATGTTTCTTCTTCTTTTCATAATATTAGACATTGTAAGGATTTTCCTTTTGGTGTGAAGCTGGTTAATGGATTTGTTTAG 1743 0.3431 MVAYSRRLKMSFIVSLMALHIVIMVTIMHQSSSFGLFEWFSQGMAMGGMTHVNVKEPNVTTNEFGLRQNVALDNFVGRHKGDANFKSSKSIPLTNSTSTPSKEINDDEKDKLLDGLLVSGFDEASCISRSQSHFYHKPSPHKPSQYLISKLRKYEELHRRCGPNTRAYNKDMKIIANSKQNGTHCAATTCKYIIWVPVNGLGNQIISIASSFLYALLTDRVMLVQFRKDKEGLFCEPFLNSTWLLPKDSPFWNTENVQSYQSIIEMEMNNTLNEDLPLAMFADLSFSYTFEERFFHCDHSQFLLGKIPLLFLKSSTYFVPSFFMTPIFEKELRKMFPDITSIFHHLGRYLFRPANEAWERITNFYQQYLTKANERVGLQIRVYDPNSTPHQDVMNHILNCTLENNLLPRVLGTKNTSLSTSSGKNKTNTKVVIVASLYPQYGNNLNTMYQNKSTVTGEVIEVYQPSGEGKQKFGDNKHNMKAWVEMYLLSLCDVLVTTSQSTFGYVAKGLGNSRPWILYNPVNNQTKEICEREFIVEPCHKYPPLHYCNGTTIEDVSSSFHNIRHCKDFPFGVKLVNGFV* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4963 580 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 4 578 - -
Tpr4g4963 580 Gene3D - 187 271 - -
Tpr4g4963 580 Pfam Xyloglucan fucosyltransferase 99 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr4g4963 580 Gene3D - 356 534 - -
Tpr4g4963 580 PANTHER FUCOSYLTRANSFERASE 2-RELATED 4 578 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4963 Tpr-Chr4 60351409 60353690 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4963 110 576 Xyloglucan Fucosyltransferase1 AT2G03220 47.034 2.69e-149 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4963 K13681 - gmx:100818288 630.943