Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4960 ATGGAAATCTTTCAAGCCACTAAGGGCATGATGGTACATAGTTTCAAGAGATTCATCACATCATTCTTTGTTGTAATTTTCATAGCACTTCCTATTTTTCTCATTGTTAACTTCATGTACTCAAACTCAAGCTTCTCTCTCTTTGAGGGGTTAACAAAAGACAAGGTGCTACTTGTTGGAGAAAGTGAATATGCTAACAACACTACAAATGTTACAACCAATATTGGAGGAAGAATTCATAACAAATCAGATGACAACATCAAAGGAAGCTATAACAATATTGTCAACAATAACACCATGTCAAAGGTGCAAGGGAAAATTGAAAATGATACTACAACAACAGAAGGAAGATCAGCTACAACCATAGGTTTGAAGAATGAGTCAATTACAAGTTCCACAAATGATTCAAATCTACATAAGGTGCAAGGGAAAATTGAAAATGGTACTACAACAACTGAAGGAAGATCAGCTACAACCATAGGCTTGAAGAATGAGTCAACTATGCATGCTGTAATCCATGATGATTACAAAGAGAAATTTCTTGATGGACTTTTAGCTTCTGAATTTGATGAAACATCATGCATAAGCAGGTTACAATCGCATTTATACCGCAAATCTTCGCCTCATAAACCTTCTTCATATTTGATATCGAAACTACGCAACTACGAAGAAATTCATAGAAGATGTGGACCTAATAGTAAAGCTTACAACAAAATCATGACAAAGATTCTTCATTCTAAGAACATTAAGGTTGATGATGCTTCAATGTGCAAATATCTTATTTGGACCCCGGCTAATGGTTTAGGGAACCAAATGGTTAGCATCGCTGCAACATTTCTTTATGCTCTTCTCACAAATCGCACGATGCTCGTACGATTCAGGAAAGACAAACAAGGTCTATTTTGTGAACCATTTCGAAATTCGACTTGGTTGTTATCAGAAAAATCTCCTTTTTGGAATCAAGATCATGTCGAAACATACCAAAGTGTGATAGAGAAGGAAAAGGATAATAAAAATTCAAAAGTGGATTTGCCATCATCACTATTTCTCAATCTACAATACCAAGCAAATTTTCATGAGAAATTCTTTCACTGTGATGATAGTCAAGCTCTTCTCATCAAAGTTCCTTTGTTGATTTTGCAATCAGATCAATATTTTGTACCTTCTCTTTTCATGACACCTTTTTTCAACAAGGAAGTGGAAGCAATGTTTGACGAAAAAGACACGGTTTTTCACCATCTCGGACGATACCTTTTCCACCCTTCAAATTCGGCGTGGAGACTAATCACAAATTTATATCAAGCACACTTGGCTAAAGCAGATGAGAAAATAGGCCTTCAAATAAGAGTGTTTAATCCTATTTCAACTCCACAAGAGGTAATTATGAATCTAGTTTTAAATTGCACTATACACAACAAATTACTTCCAAAAGTAATTGATATGAAAAATTCAATGTCTACTTCAAGTGACAAAAACAAGACGATTACGAAAGCTGTTCTTGTGGCGTCTTTATATCCAGAATATGGTGAGAATTTAAAGACGATGTATATGAATAAACCAACGGATACCGGGGAAGTAATAGAGGTTTATCAACCAAGTGGTGAAGAGCAACAAAAATTCAATGATAATAAGCATAATATGAAGGCTTGGGTTGATATGTATCTACTAAGTTTATCTGATGTGTTGGTGACTACTTCTTTGTCTACATTTGGATATGTTGCTCAAGGTTTGGGAAATTTGAAGCCATGGCTTCTATACAAGCTTACAAATAATGAGACTCATTTTCCAGCTTGTGTAAGAGAGTTTTCAATGGAGCCTTGTTATCATGCTCCTCCTAAGCATTATTGTAGTGGAAAGCCTATAAAAGATTTTGCTTCGTCTTTCATTTATACGAGAGAATGTAAGGATTATTGGCCTGGTGTAAAGTTGGTAAATTAA 1938 0.3509 MEIFQATKGMMVHSFKRFITSFFVVIFIALPIFLIVNFMYSNSSFSLFEGLTKDKVLLVGESEYANNTTNVTTNIGGRIHNKSDDNIKGSYNNIVNNNTMSKVQGKIENDTTTTEGRSATTIGLKNESITSSTNDSNLHKVQGKIENGTTTTEGRSATTIGLKNESTMHAVIHDDYKEKFLDGLLASEFDETSCISRLQSHLYRKSSPHKPSSYLISKLRNYEEIHRRCGPNSKAYNKIMTKILHSKNIKVDDASMCKYLIWTPANGLGNQMVSIAATFLYALLTNRTMLVRFRKDKQGLFCEPFRNSTWLLSEKSPFWNQDHVETYQSVIEKEKDNKNSKVDLPSSLFLNLQYQANFHEKFFHCDDSQALLIKVPLLILQSDQYFVPSLFMTPFFNKEVEAMFDEKDTVFHHLGRYLFHPSNSAWRLITNLYQAHLAKADEKIGLQIRVFNPISTPQEVIMNLVLNCTIHNKLLPKVIDMKNSMSTSSDKNKTITKAVLVASLYPEYGENLKTMYMNKPTDTGEVIEVYQPSGEEQQKFNDNKHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLKPWLLYKLTNNETHFPACVREFSMEPCYHAPPKHYCSGKPIKDFASSFIYTRECKDYWPGVKLVN* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4960 645 Gene3D - 254 308 - -
Tpr4g4960 645 PANTHER FUCOSYLTRANSFERASE 2-RELATED 14 645 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr4g4960 645 Pfam Xyloglucan fucosyltransferase 174 616 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr4g4960 645 Gene3D - 429 595 - -
Tpr4g4960 645 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 14 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4960 Tpr-Chr4 60314107 60317515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4960 178 644 Xyloglucan Fucosyltransferase1 AT2G03220 47.569 1.25e-149 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4960 K13681 - gmx:100809919 755.362