Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4942 ATGTCAAAGGTGCTAGGGAAAATTGAAAATGGTACTACAACAACAGAAGGAAGATCAGCTACAACCATAGGTTTGAAGAATGAGTCAATTACAAGTTCCACAACAAATGATTCAACTATGCATGCTGTAATCCATGATGATTACAAAGAGAAATTTCTTGATGGACTTTTAGCTTCTGAATTTGATGAAACATCATGCATAAGCAGGTTACAATCCCATTTATACCGCAAATCTTCGCCTCATAAACCTTCTTCGTATTTGATATCGAAACTACGCAACTACGAAGAAATTCATACAAGGTGTGGACCTAATGGTAAAGCTTACAACACAATCATGGCCAAGATTCTTCATTCTAAGAACATTAAGGTTGATGATGCTTCAACGTGCAAATACCTTATTTGGACCCCGGCTAATGGTTTAGGGAACCAAATGGTTAGCATAGCTGCAACATTTCTTTATGCTCTTCTCACAAACCGCACGATGCTCGTACGATTCAGGAAAGACAAACAAGGTCTATTTTGTGAACCATTTCTAAATTTGACTTGGTTGTTACCAGAAAAATCTCCTTTTTGGAATCAAGATCATGTTGAAACATATCAAAGTGTGATAGAGAAGGAAAAAGCTAACAAAAATTCAAAAGTGGATTTTCCATCATCACTATTTCTCAATCTACAATACCAAGCAAATTTTCATGAGAAATTCTTTCACTGTGATGATAGTCAAGCTCTTCTCATCAAAGTTCCTTTGTTGATTTTGCAATCAGATCAATATTTTATACCTTCTCTTTTCATGACACCTTTTTTCAACAAGGAAGTTGAAGCAATGTTCGTCGAAAAAGACATGGCTTTTCACCATCTGGGACGATACCTTTTCCATCCTTCGAATTCGGCGTGGAGACTAATCACAAATTTCTATCAAGCACACTTGGCTAAAGCAGATGAGAAAATAGGCCTTCAAATAAGAGTGTTTAATCCTATTTCAACTCCACAAGAGGTAATTATGAATCTAGTTTTAAATTGCACTATACACAACAAATTACTTCCAAAAGTAATTGATATGAAAAATTCAATGTCTACTTCAAGTGACAAAAACAAGACGATTACGAAAGCTGTTCTTGTGGCGTCTTTATATCCAGAATATGGTGAGAATTTAAAGACGATGTATATGAATAAACCAACGGATACCGGGGAAGTAATAGAGGTTTATCAACCAAGTGGTGAAGAGAAACAAAAATTCAATGATAATAAGCATAATATGAAGGCTTGGGTTGATATGTATCTACTAAGTTTATCTGATGTGTTGGTGACTACTTCTTTGTCTACATTTGGATATGTTGCTCAAGGTTTGGGAAATTTGAAGCCATGGCTTCTATACAAGCTTACAAATAATGAGACTCATTTTCCAGCTTGTGTAAGAGAGTTTTCAATGGAGCCTTGTTATCATGCTCCTTGA 1452 0.3554 MSKVLGKIENGTTTTEGRSATTIGLKNESITSSTTNDSTMHAVIHDDYKEKFLDGLLASEFDETSCISRLQSHLYRKSSPHKPSSYLISKLRNYEEIHTRCGPNGKAYNTIMAKILHSKNIKVDDASTCKYLIWTPANGLGNQMVSIAATFLYALLTNRTMLVRFRKDKQGLFCEPFLNLTWLLPEKSPFWNQDHVETYQSVIEKEKANKNSKVDFPSSLFLNLQYQANFHEKFFHCDDSQALLIKVPLLILQSDQYFIPSLFMTPFFNKEVEAMFVEKDMAFHHLGRYLFHPSNSAWRLITNFYQAHLAKADEKIGLQIRVFNPISTPQEVIMNLVLNCTIHNKLLPKVIDMKNSMSTSSDKNKTITKAVLVASLYPEYGENLKTMYMNKPTDTGEVIEVYQPSGEEKQKFNDNKHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLKPWLLYKLTNNETHFPACVREFSMEPCYHAP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4942 483 Gene3D - 299 467 - -
Tpr4g4942 483 Gene3D - 126 184 - -
Tpr4g4942 483 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 483 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr4g4942 483 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 13 483 - -
Tpr4g4942 483 Pfam Xyloglucan fucosyltransferase 46 483 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4942 Tpr-Chr4 60124480 60127358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4942 50 483 Xyloglucan Fucosyltransferase1 AT2G03220 48.182 2.05e-145 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4942 K13681 - gmx:100809919 647.506