Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4812 ATGGGTGATCCTTGTTATAAAGCACCTGAACTTTTGCTGGGTTTTACCAACTATATCTGGTCTATGGGCTGCATATTTGCTGAGATGATTAAGTTCCAACCTCTGTTTATTGGTAACGATGGACCGAAGATATTGACCGAGATATTTTGTTTGCTTGGCATGCCAACAGAAGAAAACTGGCCTGGTGTGGCTTCTATGTGCAGCTTTATTGAATTTGAAGCATTTGACCCTCCCATAAAGCCGAAGGACCTTGCAGCTGAATTCCCTAAGCTTGAACCAGATGGTCTTGATCTTCTTTCGAAAATGCTTTGCCTATGCCCAAATAGCAGGATTTCAGCTGAGGAAGCTGATGACAAAATTAGCAAGTGTACTAATTTATCGTTAAGTAATAAATTAAATTCGTATCCACAGGGATTGTTTCAATCTCGACAAGACAACTGTATCGTATTTAGGAATGTAAATGCAGGGGGATTTGCTAAGCAAAGTTGGTTTATAAAACAATTAAAATTAAAAGTGATGATTGCAAACGATTAA 534 0.3839 MGDPCYKAPELLLGFTNYIWSMGCIFAEMIKFQPLFIGNDGPKILTEIFCLLGMPTEENWPGVASMCSFIEFEAFDPPIKPKDLAAEFPKLEPDGLDLLSKMLCLCPNSRISAEEADDKISKCTNLSLSNKLNSYPQGLFQSRQDNCIVFRNVNAGGFAKQSWFIKQLKLKVMIAND* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4812 177 SUPERFAMILY Protein kinase-like (PK-like) 3 116 IPR011009 -
Tpr4g4812 177 Pfam Protein kinase domain 2 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4812 177 PANTHER CELL DIVISION PROTEIN KINASE 6 116 - -
Tpr4g4812 177 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4812 177 Gene3D Transferase(Phosphotransferase) domain 1 5 116 - -
Tpr4g4812 177 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Tpr4g4812 177 PANTHER CYCLIN-DEPENDENT KINASE 10 6 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4812 Tpr-Chr4 57590984 57593747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4812 6 118 Core Cell Cycle Gene Families AT2G38620 48.305 1.64e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Tpr4g4812 Pkinase 2.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4812 K02206 K07760 gmx:100804719 133.65