Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4599 ATGATGCCACCAAATAATAACACCCCACAAGATCATGACCAAAACAAAAACCAGCAAAAACAAAAACAACAAGAACAAGTTTCTTCTTCAGAAACAAAGAAAAGACCATCATCATCAACATCAGATGAACAAAAAGTTGCAATAAAATGTCCAAGATGTGACTCACCAAACACAAAATTCTGTTACTATAACAACTATAGTCTCACTCAACCAAGACATTTCTGCAAAACTTGTAGAAGATATTGGACAAATGGTGGATCTTTGCGAAATGTTCCGGTAGGCGGTGGTTGTAGAAAGAAACAAAAATTCAAACACTCATCATCTCAATCCATACTTTCTAAGTACTCTTCTTCACCTTCACTTGATTTTCATCTTGGTGGGTTATTACCCTTACCATTACCATTACCATTACCCTTTTCTTCAAAGGTTCATCATCATGCAAATCATCAACCTTTTTTGAATAACCAATTCTCTTCAAGTTTTCAACTTGATCATTCTCTTAGCTCAAATTCATTGATGGGTCTAAATAATTTATACCCTTTTTCTTCTTCAAATGGAAATGGAATATTCAATGGTGCAAATGGAATGAATTTCATGAATGTGAATAGTACTAGTGCTATTACTACTAATAGTACTAGTCTTGCTTCTAGTATTGAATCATTGAGTTGCATGAATCAAGATTTGCATTTGAAGCTTCAGCAGCAGAGATTAGCAACAATGTTTGGTGGTGGAGATGATAACAAGAAAGATGATATTAATGGTATTAGCAGCAGCAATGTTTTGGTTTCTGGTCAAGTTAGTAGCATTGAAAAGCCTCAAACAATTTTGTTTCAGAATCTTGATATTTCAAAGACAAATGTTCCAAATGGTGGTGATGCACCAATGGAATGGTTGTTTGGGAATTCTTATTCTTCATTCATGATGACTCCTACAATTACAACATCTAGTATTGGTGGTGTTTGCATTAATGGTGATCATGATCATGGAAACAACAATGGTTGGATTAATAATGGTGTTAATGCTTGGAGTGATGTGCAGCAGCAGCAACAACCATATACTGCTTTGCCCTAA 1071 0.3483 MMPPNNNTPQDHDQNKNQQKQKQQEQVSSSETKKRPSSSTSDEQKVAIKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGSLRNVPVGGGCRKKQKFKHSSSQSILSKYSSSPSLDFHLGGLLPLPLPLPLPFSSKVHHHANHQPFLNNQFSSSFQLDHSLSSNSLMGLNNLYPFSSSNGNGIFNGANGMNFMNVNSTSAITTNSTSLASSIESLSCMNQDLHLKLQQQRLATMFGGGDDNKKDDINGISSSNVLVSGQVSSIEKPQTILFQNLDISKTNVPNGGDAPMEWLFGNSYSSFMMTPTITTSSIGGVCINGDHDHGNNNGWINNGVNAWSDVQQQQQPYTALP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4599 356 MobiDBLite consensus disorder prediction 1 46 - -
Tpr4g4599 356 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 347 IPR045174 GO:0003700|GO:0006355
Tpr4g4599 356 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Tpr4g4599 356 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Tpr4g4599 356 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 20 347 - -
Tpr4g4599 356 Pfam Dof domain, zinc finger 48 102 IPR003851 GO:0003677|GO:0006355
Tpr4g4599 356 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4599 Tpr-Chr4 54284984 54286714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4599 29 356 C2C2-Dof Transcription Factor Family AT5G65590 39.831 1.66e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr4g4599 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4599 - - cam:101501747 319.316