Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1886 ATGGGTCTCGTTTGGAATCAACGAGGCTCGAGAACAGAGACAACAACAACAACAACAAAAACCCAAGAGGGTTTACCTGTTTCCGTTGGTGTTACTGTTCCAAAGAAGAAATGGTCGAATTTGATGCCTTTATTTGTGGCTCTTGTTGTAATTGCAGAGATCGCGTTTTTGGGTAGGTTAGATATGGCGAAGAATGCAGCTATGGTTGCTGACTTGTTCTATAGGTCTCGTGGGGTTGTTGAAAGTGATGATTTGGGGTTAGAGATGATTGGTGGTATTAGGAATCTGGAATCAGAGATAGAAAGCTGTGAGGAATGGTTGGAAAGGGAAGATGCTGTTACATATTCAAGAGACTTTGTTAAGGAACCTGTTTTTGTTTCTGGAGCTGATCAGGAGTGGAACTCATGTTCAGTTGGATGTAAATTTGGGTTTACTGGGAACCAGAAACCTGATGCTGCATTTGGCTTAGCTCAACAACCTGGAGCTGCAAGTGTTCTGCGATCAATGGAATCGGCACAATACTATGCAGAGAACAATATTCACATGGCTCGACGGAGGGGATATAACCTTGTAATGACAACCAGTCTATCGTCTGATGTTCCTGTTGGATATTTTTCATGGGCCGAATATGACATCATGGCACCGGTAAAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCATTCATTTCGAACTGTGGTGCTCGAAATTTCCGGTTACAAGCTCTTGAAGCCCTTGAAAAAACAAACATCTCGATTGACTCTTATGGTGGTTGTCATAGGAACCGGGATGGACGAGTTGACAAAGTGGAAACCCTGACGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAGTTCTTCCAATCACTTGTTGCTGGAACTATCCCTGTGGTTGTCGGTCCTCCAAATATTCAAGATTTTGCTCCTTATCCTGGTTCTGTTTTACATATTAAAGAACTACAAGATGTTGAGTCTGTTGCCAAGACCATGAGATACCTAGCAGAAAACCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGGCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAAAGAGTAGAGAGAAGGAAGAAAAGAGTCCAGACTTCAAGAAACGCCCTTGCAAATGCACTAGAGGGTCAAAAACTGTATATCATATCTATGTGAGAGAAAGAGGAACATTTGAGATGGAGTCCATTTACTTGAGATCTAGCAATTTAACTATGGAGGCCTTCAAGTCTGCTGTTCTTAAGAAGTTCACGTCCCTAAATCATGTTCCTGTATGGAAGCCTGAAAGACCTGAAATGCTAAAAGGTGGCGATGAATTAAAAATTTACAAAATATACCCTGTCGGCTTGACACAGAGACAAGCTCTTTATACCTTCCGCTTCGATGGGGATGCTGATTTCAGAGGTCACTTGGAAAGCAATCCTTGCGCAAAATTCGAAGTCGTTTTTGTGTAG 1542 0.4222 MGLVWNQRGSRTETTTTTTKTQEGLPVSVGVTVPKKKWSNLMPLFVALVVIAEIAFLGRLDMAKNAAMVADLFYRSRGVVESDDLGLEMIGGIRNLESEIESCEEWLEREDAVTYSRDFVKEPVFVSGADQEWNSCSVGCKFGFTGNQKPDAAFGLAQQPGAASVLRSMESAQYYAENNIHMARRRGYNLVMTTSLSSDVPVGYFSWAEYDIMAPVKPKTEKALAAAFISNCGARNFRLQALEALEKTNISIDSYGGCHRNRDGRVDKVETLTHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPYPGSVLHIKELQDVESVAKTMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSREKEEKSPDFKKRPCKCTRGSKTVYHIYVRERGTFEMESIYLRSSNLTMEAFKSAVLKKFTSLNHVPVWKPERPEMLKGGDELKIYKIYPVGLTQRQALYTFRFDGDADFRGHLESNPCAKFEVVFV* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1886 513 Gene3D - 166 362 IPR038577 -
Tpr4g1886 513 MobiDBLite consensus disorder prediction 7 21 - -
Tpr4g1886 513 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g1886 513 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 37 490 - -
Tpr4g1886 513 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 221 389 IPR001503 GO:0006486|GO:0008417|GO:0016020
Tpr4g1886 513 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 111 389 - -
Tpr4g1886 513 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 37 490 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1886 1 513 Xyloglucan Fucosyltransferase1 AT3G19280 64.491 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1886 K00753 - gmx:100776065 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1886 4 19857393 19865501 Tpr4g1886 4 19857393 19865501 ECH