Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1883 ATGGACATTATTATCCTCCTCTTTCTTATCTTCCTCTCATCTCTCCTATCATATCCATTCATAATCAAACACAATAAATTACATGAAACCATAGACAAGCCTAAACTTCCCCCAGGTTCAATGGGTTGGCCTTATATTGGAGAAACTTTTCAACTCTACTCTCAACACCCTAACATCTTCTTTGCTTCTAAACAAAAAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCTTGTGTGATGTTAGCAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTCAAGCCTACATATCCTAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTGTTCTTTCACCAAGGACATTACCATACTCGTATTAGGAAACTCGTTCAAAACTCGCTTTCTCCTGAATCAATCAAGAAATTGATCCCCGGTATTGAAAACGAAGTCATTTCCTCCTTGGAATCGTGGATTTCTATTGGACAAGTCGTTAACACTTTCCATGAAATGAAAAAGTTCTCTTTCAATATTGGCATTCTCTCTGTCTTTGGTAATTTGGAAAGCAATTATAGAGAACAACTTAAGGAGAATTACTGCATAGTAGAGAAAGGCTACAATTCTTTTCCAAATAGGATACCCGGAACTTCATACTCCAAAGCTGTTTTGGCGAGGCAGAGAATTCAGGAGATTATAAGTGAGATAATTTCCAAGAGAAAAGCACATAGATCAATTGAGAAGGATCTATTAGGCCACTTGCTAAATTACAAGAATGAAAAAGGTGAAATGTTAAGTGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTCTTACTTGGATTCTCAAGTACCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAACAAATGGCTGTATATGAAAACAATGATGGAGGGAAAATTCAATTGACATGGAGTCAGATAAAAAATATGCCACTTACTCATAGGGTAATATTGGAAAGTCTAAGGATGGCAAGTATTATATCATTTACTTTTAGAGAAGCTGTGGTTGATGTGGTATACAAAGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTATTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCACCTCACAGCTTTGATCCATCAAGGTTTGAGTTTGCTCCAAAGCCCAATACATTTATGCCATTTGGCATTGGAGTGCACTCTTGCCCAGGAAATGAGCTAGCCAAATTGAATATGTTGATATTAATTCACCATCTAGTAACCAAATTTAGGTGGGAGGTAGTGGAAAATCAGAGTGGAGTCCAATATAGCCCATTCCCAATCCCTCTGCAAGGTCTACCCACAAGATTTTGCAGAATCAAATAA 1413 0.3687 MDIIILLFLIFLSSLLSYPFIIKHNKLHETIDKPKLPPGSMGWPYIGETFQLYSQHPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQNSLSPESIKKLIPGIENEVISSLESWISIGQVVNTFHEMKKFSFNIGILSVFGNLESNYREQLKENYCIVEKGYNSFPNRIPGTSYSKAVLARQRIQEIISEIISKRKAHRSIEKDLLGHLLNYKNEKGEMLSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYENNDGGKIQLTWSQIKNMPLTHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHSFDPSRFEFAPKPNTFMPFGIGVHSCPGNELAKLNMLILIHHLVTKFRWEVVENQSGVQYSPFPIPLQGLPTRFCRIK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1883 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Tpr4g1883 470 PANTHER CYTOCHROME P450 26 7 467 - -
Tpr4g1883 470 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 7 467 - -
Tpr4g1883 470 Pfam Cytochrome P450 37 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 Gene3D Cytochrome P450 26 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1883 470 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1883 Tpr-Chr4 19812541 19816412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1883 2 468 Cytochrome P450 AT3G19270 68.951 0.0 677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1883 4 19812541 19816412 Tpr4g1883 4 19812541 19816412 ECH
Tpr1g3676 1 40915870 40920000 Tpr4g1883 4 19812541 19816412 ECH