Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1631 ATGGATTTTTATCAAGAGAATCTTTCTCACATTAACAATGACTTTGAGTTGCATGATTTCATTGATGATCCAAACTTTGATCAATTCATCAATTTAATTCGTGGTGAGGAGAATGAAGATACTACTATATGTAACTTCAATTCTGATCTCACAAATCCAAGTTTTGTTGATAACCCATTCCTTTCATTTCCTTCAAACCCATTTGATCACAACATAAATAACACTGTTACCTCTTTTGATCCAACTTCTTCACTCAACTCTTTCTGTTGTTTTGATGGAGAAGCTAAGGGAGAAATTAGAGGAGAAGAAAATGATGGAGATAATTACTCATCTCCAACAACTACTACAAGTGTTGATACTAAGCCACGGTCGAAAACCGATAGATCTAAGACTTTGGTTTCTGAGCGGAGGAGGCGAAGCCGAATGAAGGATAAGCTTTATGCATTGCGTTCTTTGGTTCCCAATATAACTAAGATGGATAAGGCTTCTATAATTGGAGATGCTGTTTCATATATGTGTGAACTCCAATCACAAGCAAAGAAGCTCAAGGCAGAGGTTGCAGGACTTGAAGCATCAGTAGCAATGTCCAAAACTCATCAAGGATCAATTGAAAACCACAAAAAGATTCAATTCAATGGTAACAATGGTTCAATATGCAAGAAGATTGTTAAGATGGATATGTTTCAAGTGGATGAAAGAGGGTTTTATGTTAAAATAGTATGCAATAAGGGAGAAAGAGTGGCTTCTTCATTGTACAAGTCTCTTGAATCTTTGAGAGATTTTAATGTTCAGAATTCAAATTTGGCCACTATTTCTGACAGTTTTCTACTTACATTTTCGTTGAATGTGAAAAACTATGAGCAAGAAATCAACCTGCCAAATTTAAAGCTATGGGTGATAAGTGCTTTTCTAAACCAAGGCTTTGAATTGATACCTTCTTTTCAATCTTGA 951 0.3523 MDFYQENLSHINNDFELHDFIDDPNFDQFINLIRGEENEDTTICNFNSDLTNPSFVDNPFLSFPSNPFDHNINNTVTSFDPTSSLNSFCCFDGEAKGEIRGEENDGDNYSSPTTTTSVDTKPRSKTDRSKTLVSERRRRSRMKDKLYALRSLVPNITKMDKASIIGDAVSYMCELQSQAKKLKAEVAGLEASVAMSKTHQGSIENHKKIQFNGNNGSICKKIVKMDMFQVDERGFYVKIVCNKGERVASSLYKSLESLRDFNVQNSNLATISDSFLLTFSLNVKNYEQEINLPNLKLWVISAFLNQGFELIPSFQS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1631 316 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 312 - -
Tpr4g1631 316 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 312 - -
Tpr4g1631 316 MobiDBLite consensus disorder prediction 121 139 - -
Tpr4g1631 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Tpr4g1631 316 MobiDBLite consensus disorder prediction 106 120 - -
Tpr4g1631 316 MobiDBLite consensus disorder prediction 100 139 - -
Tpr4g1631 316 SMART finulus 132 181 IPR011598 GO:0046983
Tpr4g1631 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 193 IPR036638 GO:0046983
Tpr4g1631 316 Pfam Helix-loop-helix DNA-binding domain 134 176 IPR011598 GO:0046983
Tpr4g1631 316 Gene3D - 118 192 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1631 Tpr-Chr4 16654631 16656989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1631 8 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 54.487 1.13e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr4g1631 HLH 6.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1631 - - gmx:100805451 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1631 4 16654631 16656989 Tpr4g1631 4 16654631 16656989 ECH
Tpr7g3707 7 45871492 45879062 Tpr4g1631 4 16654631 16656989 PCT