Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0362 ATGTCACAAGCAAGCATGTCCTCAGAATCAGATGGTGGCAACATAGAACTTGGTGCTAGTTTACTACTTGCTACTACTACTACTACTAGCAGCAGCAAATACAATAAGATATGGCATAGAAGCAAGATACTACTATACATAAAAGTCATTATCTCCTTGAGGAAGGATACAACTTCTAGTGACAATTATGAAGAATCTCTTCCACCATCACCACTACCAAACACTTCATTACTTCCTAGTTCTCCTGCTAGAACATCCTCTGCCAAATCATTTGTTGGAATCGATATACCTTCTCATACTCAAGAGGGGTATATTGCTGAAATTGTGAAGAAGAAGGACTTAATATCTCTTCTTAAGTTTGGTGGGGTTGATCGCGTTTGTGAAATTCTACATGGTCAAACTCATCACCCATTAGAGATCACTGGGAACCTTGGAACAAGCTTCTCTAGCATTTTATGGAATAGCTGCAAACACAATCGTTACACAATTTCAATGATGTTGATTTCGGCCTCATTGTCCTTTGCCACGGAACTCAAGCAGGAGGGACCGAAATATGGTTGGCATGATGGTGTTGCTATGGTTTTTTTTGTTTTACTTCTGCTCGCATTCTCTTCAATAACTAACTTTTGGTGCGAACGAAAAATGGTGAAATTGGCAAAGAGAAAAGGCCAGGAGGTGAAGTTCAATGTTAAAAGAGGTGAACATGATCTTGTTCTTCCCGTATACGATATTGTTGTGGGTGACATCGTGTGTTTGAGTCCCCGTGATGAGGTTCCTGCTGATGGTTTGCTTGTGAGTGGCGACGTCCTTGTGCTGGATGATGGAATACAAAATGAAAAAATTGATTGTAGGGAGAACCCATTTCTTATAGCTGGTTCAAAGGTGATTGAGGGTCATGGACAGATGGTTGTGACATCAGTTGAAAACAAGCTGAATGTGGCTGAGATGAAAGGCTCAATGAATTGTAATTTTGAAAAGAAAGGCCTTTTGTACAGTCTAATTGAGAAGCCAATTTCTAACCTTGACAAAGCCTCTCTTTTGATCTTTACACTCGTTTCATTTGTATTGTTCATTCGCCTAATTTGTAAAAAAGATGGAGATGGTGGCGGATTGCCGGATATTAAAGGGAATAATGTTTCAATTGGCCTGTTGGCGCAACTCCTTGAGAACATTTTTTTGAGACCACGAGGAAATATTTCCATTTTAGCAGGACTCTTTAGTGTTGTAATGTTGTGTGTACAACATGGAGTGCCACTTATGGTTACTTTATCTCTCCATTACCAGAATGATAAAGTATTGGTTAATCAAGAAGTTGTTCTTAATGATTTGTCAGGTTGTACAACAATGGGGTTGGTAACTGTTATCTGCATTGATGTATCTGGTGGGATCATATCAAAACCAATGGAGGTTAGCAAAATCTGGGTGGGAGAGGGGGAGAGAGATATGAGCAAGGTTGAGGAATCAGAAACATGTCTTGTACTTGACAAGCTTAAACAAGGACTTGGTTTATCAGTTCTTGCACCAGGACTATCTCCTTCTCCTGTGTCCAATTCACTTGTTTCGTGGGCAGAAAAAACATGGAAAATGGACATTTTATCTTTCAGAGAAGATTTTCACATTCTTAAGCATAGCAAACTGGATTCTGACCAAGAGGGTAGTGGAGTTTTGGCAAGAAACGTTAGGGTCGATGAACAAATTATGCACATGCACTGGAGCGGGGATGCACCCACGATATTGGAAATGTGTTCACAATACTATGATAGTGAAGGAGCATGTCATTCCATAGGAAATCAGAAACTTAAATTTAGGCAGGCGATTCAAAAGATGGAGGATAATGGCCTTAAGTCAATTGCATTTGCTTGTAGAGAAACACAAGTGCAACAACTGGAGCAAGATGAATTGACCTTGTTAGCACTGGTAGGTCTCGAATTCAAGTGTCAAGAATCAACAAAATTAGCTTTGCAAAATCTCAAGAATAATGGAATAGAAATCAAATTGGTCTCGGAGGATGACATCATGGTAGTGAAAGACATGGCTTGTGAACTGAGAATAGAAGTGCCGGTAAACAGTCACCTTGAAGGAAAAGAGCTTCAAGATTTGAATGCCAAAGAAAGATTAGTTAAAGTGGAACAAGCCATTGCAATGGGAAGTTTCAGTCCTAAAGACAAGCATCTCATGGTTAGGTGTTTGCAAGACAAAGGTGATGTGGTTGCATTCATTGACCAAGAAAGGTTGATGACCAATCATAATTCAGAAGTTCTAAAGCTAGCTGATGTAGGGATAGTTCATAACTCTCTAAGAAGAACAATTGATGGTAGAGAGAAATCTGGTATAACTATCACATGTTTCGGTGCACTGGTACCAATCATTAAGGCTGGCAGAAGTAAATATCACAGCATTCAAAAGTTCATTCAACTTCAGATGACAGTTGGTATATCAGGGTTACTCATAACCTTGATTACAATAATATTCACAGGAAACTCTCCCTTAACAGCAATCCAATTGATTTGGGTGAACATGCTAATGTGTATTCTGGGCGGTCTAATGATGGTGATGGAATTAAGTAGTGAGGATGAACAAAAACAACCATCTGGTAGGAATCAACCAATTATAACCAAGAAAATATGGAAAAACATAGTTTTTCAGGTTTTCTATCAAGCTTCTGCATGTATGATACTTGAGTTCGGGGGACACGTAACTGACAGTGAAAAGCAAGTTGTGGTAATTGAGTATGCAAAAGGCTTAGCAGATTGCATGCGGCTGAATGCCGCTCGATGGGCTATCTGTGTACTGGTCAGTGCTGTTCCATGGGTACTTGAATGGACCTTGAAGAAGATTTTTTCGGTTTTTTTCAGCACCAATTATAGTTCACCCTTGGACTCTCCAGAGTCAACCCCACAACCTTTGTTCTATCTTTATTGGGGGCTTCCATTTATGATGCTTCTTTTGTTCCCTTTTTTTTGA 2964 0.3957 MSQASMSSESDGGNIELGASLLLATTTTTSSSKYNKIWHRSKILLYIKVIISLRKDTTSSDNYEESLPPSPLPNTSLLPSSPARTSSAKSFVGIDIPSHTQEGYIAEIVKKKDLISLLKFGGVDRVCEILHGQTHHPLEITGNLGTSFSSILWNSCKHNRYTISMMLISASLSFATELKQEGPKYGWHDGVAMVFFVLLLLAFSSITNFWCERKMVKLAKRKGQEVKFNVKRGEHDLVLPVYDIVVGDIVCLSPRDEVPADGLLVSGDVLVLDDGIQNEKIDCRENPFLIAGSKVIEGHGQMVVTSVENKLNVAEMKGSMNCNFEKKGLLYSLIEKPISNLDKASLLIFTLVSFVLFIRLICKKDGDGGGLPDIKGNNVSIGLLAQLLENIFLRPRGNISILAGLFSVVMLCVQHGVPLMVTLSLHYQNDKVLVNQEVVLNDLSGCTTMGLVTVICIDVSGGIISKPMEVSKIWVGEGERDMSKVEESETCLVLDKLKQGLGLSVLAPGLSPSPVSNSLVSWAEKTWKMDILSFREDFHILKHSKLDSDQEGSGVLARNVRVDEQIMHMHWSGDAPTILEMCSQYYDSEGACHSIGNQKLKFRQAIQKMEDNGLKSIAFACRETQVQQLEQDELTLLALVGLEFKCQESTKLALQNLKNNGIEIKLVSEDDIMVVKDMACELRIEVPVNSHLEGKELQDLNAKERLVKVEQAIAMGSFSPKDKHLMVRCLQDKGDVVAFIDQERLMTNHNSEVLKLADVGIVHNSLRRTIDGREKSGITITCFGALVPIIKAGRSKYHSIQKFIQLQMTVGISGLLITLITIIFTGNSPLTAIQLIWVNMLMCILGGLMMVMELSSEDEQKQPSGRNQPIITKKIWKNIVFQVFYQASACMILEFGGHVTDSEKQVVVIEYAKGLADCMRLNAARWAICVLVSAVPWVLEWTLKKIFSVFFSTNYSSPLDSPESTPQPLFYLYWGLPFMMLLLFPFF* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0362 987 Pfam E1-E2 ATPase 227 358 - -
Tpr4g0362 987 Gene3D - 780 907 - -
Tpr4g0362 987 Pfam Cation transporting ATPase, C-terminus 828 899 IPR006068 -
Tpr4g0362 987 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 951 IPR023298 -
Tpr4g0362 987 MobiDBLite consensus disorder prediction 60 79 - -
Tpr4g0362 987 SUPERFAMILY HAD-like 634 766 IPR036412 -
Tpr4g0362 987 Gene3D - 469 638 IPR023299 GO:0000166
Tpr4g0362 987 Gene3D - 201 297 - -
Tpr4g0362 987 PANTHER CATION TRANSPORTING ATPASE 82 906 - -
Tpr4g0362 987 PANTHER CATION TRANSPORTING ATPASE 905 961 - -
Tpr4g0362 987 Gene3D - 639 779 IPR023214 -
Tpr4g0362 987 Gene3D - 298 468 - -
Tpr4g0362 987 SUPERFAMILY Calcium ATPase, transduction domain A 227 308 IPR008250 -
Tpr4g0362 987 PANTHER CATION-TRANSPORTING ATPASE PLANT 82 906 - -
Tpr4g0362 987 PANTHER CATION-TRANSPORTING ATPASE PLANT 905 961 - -
Tpr4g0362 987 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 510 642 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0362 Tpr-Chr4 3554490 3559482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0362 162 946 Primary Pumps ATPases AT3G22910 30.278 1.69e-110 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0362 K01537 - gmx:102661547 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0362 4 3554490 3559482 Tpr4g0362 4 3554490 3559482 ECH