Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4802 ATGTCTAACTCTCATAATCCAATAGTTAAACATTCTGAGAATTCATTTTGCTCAGTTTGTTACAACAAGAGACCAAAACTTGATTGGACAAGAAGGGATTTCACATATGCTGAGTTGCATATTGCAACACATGGTTTTTCCATGACGAATTTTCTCTCAGAAGGTGGTTTTGGTTCTGTCTATAAAGGAGAGATTCATGGACACAAGATTGCTGTTAAAAAATGTATTCATGCAAGTCACAAACAAGAGAAGGAATTCAAATCTGAAGTTGATACACTAAGCAAAGCAAGACATGAAAATGTTGTTATGTTGCTTGGATCATGTTCAGAAGGGAAAAATAGGCTTCTTGTTTATGAATTTGTTTGCAATGGTTCACTAGACCAACATTTATCAAGACATTCTCGAAAACCTCTTTGTTGGAAAGATAGAGTGAAAATTGCTAATGGAGCTGCCAAAGGACTTCTACATCTGCATCAGAACAACATCATACATAGAGATATAAAATCAAACAACATACTTCTTACACATGACTGTGAACTAGGTGATTTTGGTTTGGCTAAAATTGCAAGTGGAGAATTCTCAAGTTCAATAGAATGTCCTGGAAATTTGGCATATTGGGCACCAGAATATGCAGCATATGGTAAAGTAACAAATAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTGTTGAGCTAATAACAGGAATGAGGACTACAGACAGAAGACTTGGTGGAAAGAGTCTAGTGGGATGGGCTAGGCCACTACTAATAGAAGGGAATTGTAAAAAATTTGTTGATGAAAGGATAATGGATTCCCATGACTGTCACCAAATCCATTGGATGAGTCGTCTAGTTGGAAATTGTTTAAACAAAGATCCTCATAAACGATTGGATATGAGTACAGTAAGTCTATGCTTCCATTATTTCTTTATCTTCCACTTTCATATTCACAAAATCTAG 960 0.3573 MSNSHNPIVKHSENSFCSVCYNKRPKLDWTRRDFTYAELHIATHGFSMTNFLSEGGFGSVYKGEIHGHKIAVKKCIHASHKQEKEFKSEVDTLSKARHENVVMLLGSCSEGKNRLLVYEFVCNGSLDQHLSRHSRKPLCWKDRVKIANGAAKGLLHLHQNNIIHRDIKSNNILLTHDCELGDFGLAKIASGEFSSSIECPGNLAYWAPEYAAYGKVTNKTDVYSFGVVLVELITGMRTTDRRLGGKSLVGWARPLLIEGNCKKFVDERIMDSHDCHQIHWMSRLVGNCLNKDPHKRLDMSTVSLCFHYFFIFHFHIHKI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4802 319 SUPERFAMILY Protein kinase-like (PK-like) 29 304 IPR011009 -
Tpr3g4802 319 ProSiteProfiles Protein kinase domain profile. 46 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4802 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Tpr3g4802 319 SMART serkin_6 46 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4802 319 PANTHER OS01G0253100 PROTEIN 6 303 IPR045271 GO:0004714|GO:0006468
Tpr3g4802 319 Pfam Protein tyrosine and serine/threonine kinase 48 302 IPR001245 GO:0004672|GO:0006468
Tpr3g4802 319 PANTHER TYROSINE KINASE FAMILY PROTEIN 6 303 - -
Tpr3g4802 319 PIRSF ILK 18 304 - -
Tpr3g4802 319 Gene3D Phosphorylase Kinase; domain 1 26 120 - -
Tpr3g4802 319 Gene3D Transferase(Phosphotransferase) domain 1 121 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4802 Tpr-Chr3 52874464 52875897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4802 34 302 Trihelix Transcription Factor Family AT5G38560 43.158 1.82e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr3g4802 PK_Tyr_Ser-Thr 8.9e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4802 3 52874464 52875897 Tpr7g1546 7 17386551 17391727 PCT