Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4777 ATGGGCACAGAAAAAATAAGATCTTGTGCAAATTTCATTGAGAATTCTAAGCCATACTTTGCCATGATCATTTTACAGTTTGGTTATGCAGGCATGAACATTATAACCAAGCTTTCTCTCAATGGAGGCATGAGTCACTATGTTCTTGTTGTATATCGCCACGTTTTTGCAACTATTGCTATAGCTCCCTTTGCCATAATCTTTGAAAGGAAGGCTCAACCAAAGATTACATTTTCAATTTTCATGCAAATTTTCCTCCTAGCTCTGCTTGGGCCAGTGATAGATCAAAATTTCTACTATGCTGGGTTGAAATTAACATCCCCAACCTTCTCATGTGCAATCAGCAATATGCTTCCGGCCATGACATTCGTGATCGCAATTTTATGCCGGATGGAAAAAATTAACATGAAGAAGTTGAGATGCCAAGCAAAGGTAATTGGAACAATGTTAACTGTGGCTGGTGCAATGTTGATGACCTTATACAAAGGTCCTATTGTGGAGTTGTTTTGGAGGACTAAAGATCCACTTCATAGTAAAGACAATACAACAAACATCACAACATCTTCAAGCAATGATACTTGGTTCCTAGGCTCCATTTTACTAATTATTTCAACTTTGGCATGGGCATCCTTGTTTGTTTTACAAGCTAAAGCTATAGAAACATACAAGAATCATCAGCTAACACTCACATCACTTGTATGTTTCTTTGGCACGCTTCTAGCTTTTGCTACAACTTTGGTTATGGAACACAAAGATTCTGTGTGGACAATTGGTTGGGATATGAATTTATTAGCTTCTGCCTATGCGGGGATTGTTACATCAAGTACAGCATACTATGTACAAGGGTTGGTAATGAGAAAGAAAGGACCTGTTTTTACTACTTCATTTAGCCCTTTGATGATGATTATTGTAGCATTCATGGGTTCCTTTATCCTTGCAGAGCAGATTTTTCTTGGAAGTGTGATTGGTTCCATCTTGGTTATCATTGGTTTATATTCTGTTTTGTGGGGTAAGCACAAAGAACAAGTGGTGGAAAATAAAGTAGCACCAGATGATAAACCCTTGCCAATAAAGGGTGCTAGGGTAAATGGAAATAAAGAGACAATTTCTGAATCCATTGATCAATTTAGTGAAGCAAAATCATATCAGAAAGGAGAACCAACCATTTCAGTAGTTATTATTAATTGCAACATAAGTTGA 1200 0.3717 MGTEKIRSCANFIENSKPYFAMIILQFGYAGMNIITKLSLNGGMSHYVLVVYRHVFATIAIAPFAIIFERKAQPKITFSIFMQIFLLALLGPVIDQNFYYAGLKLTSPTFSCAISNMLPAMTFVIAILCRMEKINMKKLRCQAKVIGTMLTVAGAMLMTLYKGPIVELFWRTKDPLHSKDNTTNITTSSSNDTWFLGSILLIISTLAWASLFVLQAKAIETYKNHQLTLTSLVCFFGTLLAFATTLVMEHKDSVWTIGWDMNLLASAYAGIVTSSTAYYVQGLVMRKKGPVFTTSFSPLMMIIVAFMGSFILAEQIFLGSVIGSILVIIGLYSVLWGKHKEQVVENKVAPDDKPLPIKGARVNGNKETISESIDQFSEAKSYQKGEPTISVVIINCNIS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4777 399 PANTHER WAT1-RELATED PROTEIN 12 375 - -
Tpr3g4777 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 340 - -
Tpr3g4777 399 PANTHER WAT1-RELATED PROTEIN 12 375 IPR030184 GO:0016021|GO:0022857
Tpr3g4777 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Tpr3g4777 399 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Tpr3g4777 399 Pfam EamA-like transporter family 196 335 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4777 Tpr-Chr3 52706977 52710789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4777 1 371 Nodulin-like Gene Family AT5G07050 67.109 4.07e-180 505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4777 3 52706977 52710789 Tpr7g1568 7 17709436 17713380 PCT